Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HMCN1Q96RW7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HMCN1Q96RW7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HMCN1Q96RW7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
HMCN1Q96RW7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
HMCN1Q96RW7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HMCN1Q96RW7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HMCN1Q96RW7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
HMCN1Q96RW7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HMCN1Q96RW7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HMCN1Q96RW7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
HMCN1Q96RW7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HMCN1Q96RW7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC7.51□□□□□ -1.21
HMCN1Q96RW7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC7.51□□□□□ -1.21
HMCN1Q96RW7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC7.51□□□□□ -1.21
HMCN1Q96RW7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC7.51□□□□□ -1.21
HMCN1Q96RW7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HMCN1Q96RW7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HMCN1Q96RW7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
HMCN1Q96RW7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC7.51□□□□□ -1.21
HMCN1Q96RW7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HMCN1Q96RW7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
HMCN1Q96RW7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HMCN1Q96RW7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
HMCN1Q96RW7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC7.5□□□□□ -1.21
HMCN1Q96RW7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC7.5□□□□□ -1.21
HMCN1Q96RW7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HMCN1Q96RW7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC7.5□□□□□ -1.21
HMCN1Q96RW7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HMCN1Q96RW7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
HMCN1Q96RW7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
HMCN1Q96RW7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC7.5□□□□□ -1.21
HMCN1Q96RW7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC7.5□□□□□ -1.21
HMCN1Q96RW7 AL499627.2-201ENST00000606283 725 ntBASIC7.5□□□□□ -1.21
HMCN1Q96RW7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HMCN1Q96RW7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
HMCN1Q96RW7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC7.49□□□□□ -1.21
HMCN1Q96RW7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
HMCN1Q96RW7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC7.49□□□□□ -1.21
HMCN1Q96RW7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
HMCN1Q96RW7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
HMCN1Q96RW7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC7.49□□□□□ -1.21
HMCN1Q96RW7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC7.49□□□□□ -1.21
HMCN1Q96RW7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC7.49□□□□□ -1.21
HMCN1Q96RW7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
HMCN1Q96RW7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
HMCN1Q96RW7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC7.48□□□□□ -1.21
HMCN1Q96RW7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC7.48□□□□□ -1.21
HMCN1Q96RW7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
HMCN1Q96RW7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC7.48□□□□□ -1.21
HMCN1Q96RW7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
HMCN1Q96RW7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC7.48□□□□□ -1.21
HMCN1Q96RW7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
HMCN1Q96RW7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
HMCN1Q96RW7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC7.48□□□□□ -1.21
HMCN1Q96RW7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
HMCN1Q96RW7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
HMCN1Q96RW7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC7.48□□□□□ -1.21
HMCN1Q96RW7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC7.48□□□□□ -1.21
HMCN1Q96RW7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
HMCN1Q96RW7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC7.48□□□□□ -1.21
HMCN1Q96RW7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC7.48□□□□□ -1.21
HMCN1Q96RW7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
HMCN1Q96RW7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC7.47□□□□□ -1.21
HMCN1Q96RW7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC7.47□□□□□ -1.21
HMCN1Q96RW7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
HMCN1Q96RW7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HMCN1Q96RW7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC7.47□□□□□ -1.21
HMCN1Q96RW7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
HMCN1Q96RW7 SMUG1P1-201ENST00000590640 811 ntBASIC7.47□□□□□ -1.21
HMCN1Q96RW7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
HMCN1Q96RW7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
HMCN1Q96RW7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
HMCN1Q96RW7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC7.46□□□□□ -1.21
HMCN1Q96RW7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
HMCN1Q96RW7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC7.46□□□□□ -1.21
HMCN1Q96RW7 AC123595.1-201ENST00000440769 1046 ntBASIC7.46□□□□□ -1.21
HMCN1Q96RW7 CDCA4P2-201ENST00000441182 718 ntBASIC7.46□□□□□ -1.21
HMCN1Q96RW7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC7.46□□□□□ -1.21
HMCN1Q96RW7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
HMCN1Q96RW7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC7.46□□□□□ -1.22
HMCN1Q96RW7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
HMCN1Q96RW7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HMCN1Q96RW7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
HMCN1Q96RW7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC7.46□□□□□ -1.22
HMCN1Q96RW7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
HMCN1Q96RW7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
HMCN1Q96RW7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC7.46□□□□□ -1.22
HMCN1Q96RW7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HMCN1Q96RW7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
HMCN1Q96RW7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC7.46□□□□□ -1.22
HMCN1Q96RW7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC7.46□□□□□ -1.22
HMCN1Q96RW7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HMCN1Q96RW7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HMCN1Q96RW7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HMCN1Q96RW7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
HMCN1Q96RW7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC7.46□□□□□ -1.22
HMCN1Q96RW7 DUX4L2-201ENST00000561772 1275 ntBASIC7.46□□□□□ -1.22
HMCN1Q96RW7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC7.46□□□□□ -1.22
HMCN1Q96RW7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms