Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM54Q969K7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.99■□□□□ 0.95
TMEM54Q969K7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM54Q969K7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM54Q969K7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.98■□□□□ 0.95
TMEM54Q969K7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM54Q969K7 AC022211.4-201ENST00000625094 2161 ntBASIC20.98■□□□□ 0.95
TMEM54Q969K7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM54Q969K7 AC142381.3-201ENST00000568208 1670 ntBASIC20.98■□□□□ 0.95
TMEM54Q969K7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.98■□□□□ 0.95
TMEM54Q969K7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TMEM54Q969K7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM54Q969K7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM54Q969K7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM54Q969K7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM54Q969K7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.97■□□□□ 0.95
TMEM54Q969K7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.97■□□□□ 0.95
TMEM54Q969K7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
TMEM54Q969K7 AC087393.1-201ENST00000582896 145 ntBASIC20.97■□□□□ 0.95
TMEM54Q969K7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM54Q969K7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM54Q969K7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.96■□□□□ 0.95
TMEM54Q969K7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.96■□□□□ 0.95
TMEM54Q969K7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.96■□□□□ 0.95
TMEM54Q969K7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM54Q969K7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TMEM54Q969K7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM54Q969K7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM54Q969K7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM54Q969K7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TMEM54Q969K7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TMEM54Q969K7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM54Q969K7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TMEM54Q969K7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM54Q969K7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM54Q969K7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM54Q969K7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM54Q969K7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM54Q969K7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM54Q969K7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.94■□□□□ 0.94
TMEM54Q969K7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM54Q969K7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.94■□□□□ 0.94
TMEM54Q969K7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMEM54Q969K7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TMEM54Q969K7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TMEM54Q969K7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM54Q969K7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.93■□□□□ 0.94
TMEM54Q969K7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM54Q969K7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM54Q969K7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TMEM54Q969K7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM54Q969K7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMEM54Q969K7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM54Q969K7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM54Q969K7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM54Q969K7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.92■□□□□ 0.94
TMEM54Q969K7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.92■□□□□ 0.94
TMEM54Q969K7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM54Q969K7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM54Q969K7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM54Q969K7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM54Q969K7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.91■□□□□ 0.94
TMEM54Q969K7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TMEM54Q969K7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM54Q969K7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM54Q969K7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM54Q969K7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM54Q969K7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.91■□□□□ 0.94
TMEM54Q969K7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM54Q969K7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM54Q969K7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM54Q969K7 FOXO3B-201ENST00000395675 1928 ntBASIC20.9■□□□□ 0.94
TMEM54Q969K7 AC138932.3-201ENST00000567634 1902 ntBASIC20.9■□□□□ 0.94
TMEM54Q969K7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM54Q969K7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.9■□□□□ 0.94
TMEM54Q969K7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM54Q969K7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM54Q969K7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.9■□□□□ 0.94
TMEM54Q969K7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM54Q969K7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM54Q969K7 AC004987.1-201ENST00000428627 508 ntBASIC20.9■□□□□ 0.94
TMEM54Q969K7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.9■□□□□ 0.94
TMEM54Q969K7 DUX4L18-201ENST00000553347 1267 ntBASIC20.9■□□□□ 0.94
TMEM54Q969K7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM54Q969K7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM54Q969K7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TMEM54Q969K7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM54Q969K7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TMEM54Q969K7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM54Q969K7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.89■□□□□ 0.93
TMEM54Q969K7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM54Q969K7 ATP5G2P3-201ENST00000429083 425 ntBASIC20.89■□□□□ 0.93
TMEM54Q969K7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.89■□□□□ 0.93
TMEM54Q969K7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
TMEM54Q969K7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TMEM54Q969K7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM54Q969K7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM54Q969K7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM54Q969K7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.88■□□□□ 0.93
TMEM54Q969K7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms