Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC29.64■■■□□ 2.34
RPGRQ92834 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC29.64■■■□□ 2.34
RPGRQ92834 AC011551.1-201ENST00000614101 683 ntBASIC29.64■■■□□ 2.34
RPGRQ92834 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
RPGRQ92834 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
RPGRQ92834 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
RPGRQ92834 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
RPGRQ92834 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
RPGRQ92834 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
RPGRQ92834 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC29.63■■■□□ 2.33
RPGRQ92834 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC29.63■■■□□ 2.33
RPGRQ92834 GAK-223ENST00000628912 497 ntTSL 5 BASIC29.63■■■□□ 2.33
RPGRQ92834 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RPGRQ92834 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
RPGRQ92834 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
RPGRQ92834 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
RPGRQ92834 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RPGRQ92834 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC29.62■■■□□ 2.33
RPGRQ92834 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC29.62■■■□□ 2.33
RPGRQ92834 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC29.62■■■□□ 2.33
RPGRQ92834 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC29.62■■■□□ 2.33
RPGRQ92834 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC29.62■■■□□ 2.33
RPGRQ92834 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC29.62■■■□□ 2.33
RPGRQ92834 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC29.62■■■□□ 2.33
RPGRQ92834 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
RPGRQ92834 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC29.61■■■□□ 2.33
RPGRQ92834 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC29.61■■■□□ 2.33
RPGRQ92834 MIR6724-1-201ENST00000616420 92 ntBASIC29.61■■■□□ 2.33
RPGRQ92834 MIR6724-2-201ENST00000616483 92 ntBASIC29.61■■■□□ 2.33
RPGRQ92834 MIR6724-4-201ENST00000617390 92 ntBASIC29.61■■■□□ 2.33
RPGRQ92834 MIR6724-3-201ENST00000622482 92 ntBASIC29.61■■■□□ 2.33
RPGRQ92834 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
RPGRQ92834 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
RPGRQ92834 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
RPGRQ92834 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC29.6■■■□□ 2.33
RPGRQ92834 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC29.6■■■□□ 2.33
RPGRQ92834 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC29.6■■■□□ 2.33
RPGRQ92834 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
RPGRQ92834 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC29.6■■■□□ 2.33
RPGRQ92834 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
RPGRQ92834 SENP5-202ENST00000419026 973 ntTSL 3 BASIC29.59■■■□□ 2.33
RPGRQ92834 MIR3621-201ENST00000580529 85 ntBASIC29.59■■■□□ 2.33
RPGRQ92834 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
RPGRQ92834 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
RPGRQ92834 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
RPGRQ92834 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
RPGRQ92834 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC29.58■■■□□ 2.33
RPGRQ92834 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
RPGRQ92834 SNAI3-AS1-204ENST00000567997 2048 ntBASIC29.57■■■□□ 2.32
RPGRQ92834 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC29.57■■■□□ 2.32
RPGRQ92834 LSM4-201ENST00000252816 986 ntTSL 2 BASIC29.57■■■□□ 2.32
RPGRQ92834 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
RPGRQ92834 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
RPGRQ92834 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC29.57■■■□□ 2.32
RPGRQ92834 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC29.56■■■□□ 2.32
RPGRQ92834 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC29.56■■■□□ 2.32
RPGRQ92834 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC29.56■■■□□ 2.32
RPGRQ92834 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
RPGRQ92834 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC29.56■■■□□ 2.32
RPGRQ92834 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
RPGRQ92834 TK2-202ENST00000417693 1046 ntTSL 2 BASIC29.55■■■□□ 2.32
RPGRQ92834 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC29.55■■■□□ 2.32
RPGRQ92834 AL356740.2-201ENST00000601559 647 ntBASIC29.55■■■□□ 2.32
RPGRQ92834 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
RPGRQ92834 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
RPGRQ92834 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC29.55■■■□□ 2.32
RPGRQ92834 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC29.54■■■□□ 2.32
RPGRQ92834 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
RPGRQ92834 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
RPGRQ92834 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.54■■■□□ 2.32
RPGRQ92834 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
RPGRQ92834 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC29.53■■■□□ 2.32
RPGRQ92834 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC29.53■■■□□ 2.32
RPGRQ92834 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.53■■■□□ 2.32
RPGRQ92834 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
RPGRQ92834 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC29.52■■■□□ 2.32
RPGRQ92834 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC29.52■■■□□ 2.32
RPGRQ92834 EXOG-217ENST00000630638 197 ntTSL 5 BASIC29.52■■■□□ 2.32
RPGRQ92834 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
RPGRQ92834 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
RPGRQ92834 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC29.51■■■□□ 2.31
RPGRQ92834 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC29.51■■■□□ 2.31
RPGRQ92834 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RPGRQ92834 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC29.51■■■□□ 2.31
RPGRQ92834 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC29.51■■■□□ 2.31
RPGRQ92834 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC29.5■■■□□ 2.31
RPGRQ92834 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
RPGRQ92834 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC29.5■■■□□ 2.31
RPGRQ92834 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
RPGRQ92834 AC110285.6-201ENST00000617652 491 ntBASIC29.5■■■□□ 2.31
RPGRQ92834 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
RPGRQ92834 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC29.5■■■□□ 2.31
RPGRQ92834 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
RPGRQ92834 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RPGRQ92834 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC29.49■■■□□ 2.31
RPGRQ92834 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RPGRQ92834 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC29.49■■■□□ 2.31
RPGRQ92834 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC29.49■■■□□ 2.31
RPGRQ92834 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
RPGRQ92834 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms