Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
SRFBP1Q8NEF9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SRFBP1Q8NEF9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SRFBP1Q8NEF9 AC020928.2-201ENST00000588717 2197 ntBASIC22.59■■□□□ 1.21
SRFBP1Q8NEF9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.59■■□□□ 1.21
SRFBP1Q8NEF9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SRFBP1Q8NEF9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SRFBP1Q8NEF9 AC087393.1-201ENST00000582896 145 ntBASIC22.59■■□□□ 1.21
SRFBP1Q8NEF9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
SRFBP1Q8NEF9 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SRFBP1Q8NEF9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
SRFBP1Q8NEF9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SRFBP1Q8NEF9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
SRFBP1Q8NEF9 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
SRFBP1Q8NEF9 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.58■■□□□ 1.21
SRFBP1Q8NEF9 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
SRFBP1Q8NEF9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SRFBP1Q8NEF9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.57■■□□□ 1.2
SRFBP1Q8NEF9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SRFBP1Q8NEF9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
SRFBP1Q8NEF9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
SRFBP1Q8NEF9 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SRFBP1Q8NEF9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.57■■□□□ 1.2
SRFBP1Q8NEF9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SRFBP1Q8NEF9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SRFBP1Q8NEF9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.57■■□□□ 1.2
SRFBP1Q8NEF9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SRFBP1Q8NEF9 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SRFBP1Q8NEF9 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SRFBP1Q8NEF9 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
SRFBP1Q8NEF9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SRFBP1Q8NEF9 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.56■■□□□ 1.2
SRFBP1Q8NEF9 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SRFBP1Q8NEF9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.56■■□□□ 1.2
SRFBP1Q8NEF9 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SRFBP1Q8NEF9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.55■■□□□ 1.2
SRFBP1Q8NEF9 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
SRFBP1Q8NEF9 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.55■■□□□ 1.2
SRFBP1Q8NEF9 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
SRFBP1Q8NEF9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
SRFBP1Q8NEF9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SRFBP1Q8NEF9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SRFBP1Q8NEF9 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
SRFBP1Q8NEF9 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SRFBP1Q8NEF9 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SRFBP1Q8NEF9 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
SRFBP1Q8NEF9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SRFBP1Q8NEF9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SRFBP1Q8NEF9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.54■■□□□ 1.2
SRFBP1Q8NEF9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.54■■□□□ 1.2
SRFBP1Q8NEF9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SRFBP1Q8NEF9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SRFBP1Q8NEF9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.54■■□□□ 1.2
SRFBP1Q8NEF9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
SRFBP1Q8NEF9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.53■■□□□ 1.2
SRFBP1Q8NEF9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SRFBP1Q8NEF9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
SRFBP1Q8NEF9 ATP5G2P3-201ENST00000429083 425 ntBASIC22.53■■□□□ 1.2
SRFBP1Q8NEF9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.53■■□□□ 1.2
SRFBP1Q8NEF9 AC012354.3-201ENST00000623734 483 ntBASIC22.53■■□□□ 1.2
SRFBP1Q8NEF9 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SRFBP1Q8NEF9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
SRFBP1Q8NEF9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SRFBP1Q8NEF9 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
SRFBP1Q8NEF9 TSPY13P-201ENST00000338964 914 ntBASIC22.52■■□□□ 1.2
SRFBP1Q8NEF9 AC004987.1-201ENST00000428627 508 ntBASIC22.52■■□□□ 1.2
SRFBP1Q8NEF9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.52■■□□□ 1.2
SRFBP1Q8NEF9 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.52■■□□□ 1.2
SRFBP1Q8NEF9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SRFBP1Q8NEF9 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SRFBP1Q8NEF9 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SRFBP1Q8NEF9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.19
SRFBP1Q8NEF9 SLC6A10P-202ENST00000431994 2058 ntBASIC22.51■■□□□ 1.19
SRFBP1Q8NEF9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SRFBP1Q8NEF9 AC139795.1-202ENST00000500444 432 ntBASIC22.51■■□□□ 1.19
SRFBP1Q8NEF9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
SRFBP1Q8NEF9 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
SRFBP1Q8NEF9 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SRFBP1Q8NEF9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SRFBP1Q8NEF9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SRFBP1Q8NEF9 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SRFBP1Q8NEF9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.5■■□□□ 1.19
SRFBP1Q8NEF9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.5■■□□□ 1.19
SRFBP1Q8NEF9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SRFBP1Q8NEF9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SRFBP1Q8NEF9 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
SRFBP1Q8NEF9 DUX4L18-201ENST00000553347 1267 ntBASIC22.5■■□□□ 1.19
SRFBP1Q8NEF9 AC074183.2-201ENST00000623112 922 ntBASIC22.5■■□□□ 1.19
SRFBP1Q8NEF9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SRFBP1Q8NEF9 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SRFBP1Q8NEF9 FOXO3B-201ENST00000395675 1928 ntBASIC22.49■■□□□ 1.19
SRFBP1Q8NEF9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SRFBP1Q8NEF9 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SRFBP1Q8NEF9 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SRFBP1Q8NEF9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SRFBP1Q8NEF9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.49■■□□□ 1.19
SRFBP1Q8NEF9 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.49■■□□□ 1.19
SRFBP1Q8NEF9 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SRFBP1Q8NEF9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SRFBP1Q8NEF9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms