Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.69■■□□□ 1.86
RNF180Q86T96 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
RNF180Q86T96 AC005837.3-201ENST00000612163 286 ntBASIC26.69■■□□□ 1.86
RNF180Q86T96 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
RNF180Q86T96 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RNF180Q86T96 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RNF180Q86T96 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.68■■□□□ 1.86
RNF180Q86T96 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.68■■□□□ 1.86
RNF180Q86T96 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RNF180Q86T96 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
RNF180Q86T96 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RNF180Q86T96 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.67■■□□□ 1.86
RNF180Q86T96 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.67■■□□□ 1.86
RNF180Q86T96 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RNF180Q86T96 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.66■■□□□ 1.86
RNF180Q86T96 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.66■■□□□ 1.86
RNF180Q86T96 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.66■■□□□ 1.86
RNF180Q86T96 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.66■■□□□ 1.86
RNF180Q86T96 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.66■■□□□ 1.86
RNF180Q86T96 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
RNF180Q86T96 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
RNF180Q86T96 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
RNF180Q86T96 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RNF180Q86T96 MIR4466-201ENST00000606121 54 ntBASIC26.65■■□□□ 1.86
RNF180Q86T96 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
RNF180Q86T96 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
RNF180Q86T96 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RNF180Q86T96 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
RNF180Q86T96 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
RNF180Q86T96 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.64■■□□□ 1.86
RNF180Q86T96 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.64■■□□□ 1.86
RNF180Q86T96 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.64■■□□□ 1.86
RNF180Q86T96 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.64■■□□□ 1.85
RNF180Q86T96 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
RNF180Q86T96 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
RNF180Q86T96 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.63■■□□□ 1.85
RNF180Q86T96 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RNF180Q86T96 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
RNF180Q86T96 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RNF180Q86T96 AC133561.4-201ENST00000566112 224 ntBASIC26.62■■□□□ 1.85
RNF180Q86T96 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.62■■□□□ 1.85
RNF180Q86T96 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
RNF180Q86T96 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RNF180Q86T96 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
RNF180Q86T96 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
RNF180Q86T96 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.6■■□□□ 1.85
RNF180Q86T96 AP004609.3-201ENST00000610705 1884 ntBASIC26.6■■□□□ 1.85
RNF180Q86T96 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.6■■□□□ 1.85
RNF180Q86T96 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RNF180Q86T96 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RNF180Q86T96 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RNF180Q86T96 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.59■■□□□ 1.85
RNF180Q86T96 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.59■■□□□ 1.85
RNF180Q86T96 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RNF180Q86T96 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.59■■□□□ 1.85
RNF180Q86T96 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.59■■□□□ 1.85
RNF180Q86T96 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
RNF180Q86T96 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.58■■□□□ 1.85
RNF180Q86T96 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.58■■□□□ 1.85
RNF180Q86T96 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
RNF180Q86T96 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RNF180Q86T96 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.57■■□□□ 1.84
RNF180Q86T96 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.57■■□□□ 1.84
RNF180Q86T96 AL512631.2-201ENST00000604634 923 ntBASIC26.57■■□□□ 1.84
RNF180Q86T96 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.57■■□□□ 1.84
RNF180Q86T96 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.56■■□□□ 1.84
RNF180Q86T96 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RNF180Q86T96 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RNF180Q86T96 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RNF180Q86T96 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.56■■□□□ 1.84
RNF180Q86T96 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.56■■□□□ 1.84
RNF180Q86T96 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
RNF180Q86T96 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.55■■□□□ 1.84
RNF180Q86T96 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.55■■□□□ 1.84
RNF180Q86T96 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RNF180Q86T96 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.55■■□□□ 1.84
RNF180Q86T96 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RNF180Q86T96 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
RNF180Q86T96 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RNF180Q86T96 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.54■■□□□ 1.84
RNF180Q86T96 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.54■■□□□ 1.84
RNF180Q86T96 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.54■■□□□ 1.84
RNF180Q86T96 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.54■■□□□ 1.84
RNF180Q86T96 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
RNF180Q86T96 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
RNF180Q86T96 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RNF180Q86T96 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.53■■□□□ 1.84
RNF180Q86T96 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.53■■□□□ 1.84
RNF180Q86T96 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RNF180Q86T96 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
RNF180Q86T96 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
RNF180Q86T96 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
RNF180Q86T96 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.51■■□□□ 1.84
RNF180Q86T96 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
RNF180Q86T96 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
RNF180Q86T96 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RNF180Q86T96 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RNF180Q86T96 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RNF180Q86T96 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.51■■□□□ 1.83
RNF180Q86T96 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms