Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 AL031602.1-201ENST00000633169 911 ntBASIC13.09□□□□□ -0.31
RNF213Q63HN8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
RNF213Q63HN8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC13.08□□□□□ -0.31
RNF213Q63HN8 MTDHP2-201ENST00000601468 714 ntBASIC13.08□□□□□ -0.31
RNF213Q63HN8 GRAMD4P4-201ENST00000613563 1115 ntBASIC13.08□□□□□ -0.31
RNF213Q63HN8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC13.08□□□□□ -0.32
RNF213Q63HN8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RNF213Q63HN8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RNF213Q63HN8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC13.08□□□□□ -0.32
RNF213Q63HN8 GXYLT1P5-201ENST00000614548 1189 ntBASIC13.08□□□□□ -0.32
RNF213Q63HN8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF213Q63HN8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC13.08□□□□□ -0.32
RNF213Q63HN8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC13.08□□□□□ -0.32
RNF213Q63HN8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RNF213Q63HN8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RNF213Q63HN8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RNF213Q63HN8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RNF213Q63HN8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RNF213Q63HN8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RNF213Q63HN8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC13.07□□□□□ -0.32
RNF213Q63HN8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RNF213Q63HN8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RNF213Q63HN8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RNF213Q63HN8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RNF213Q63HN8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
RNF213Q63HN8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RNF213Q63HN8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC13.06□□□□□ -0.32
RNF213Q63HN8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC13.06□□□□□ -0.32
RNF213Q63HN8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RNF213Q63HN8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RNF213Q63HN8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC13.06□□□□□ -0.32
RNF213Q63HN8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RNF213Q63HN8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
RNF213Q63HN8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC13.05□□□□□ -0.32
RNF213Q63HN8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC13.05□□□□□ -0.32
RNF213Q63HN8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RNF213Q63HN8 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RNF213Q63HN8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RNF213Q63HN8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC13.05□□□□□ -0.32
RNF213Q63HN8 MIR4281-201ENST00000580852 62 ntBASIC13.05□□□□□ -0.32
RNF213Q63HN8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RNF213Q63HN8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RNF213Q63HN8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RNF213Q63HN8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RNF213Q63HN8 TSPY20P-201ENST00000450910 630 ntBASIC13.05□□□□□ -0.32
RNF213Q63HN8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RNF213Q63HN8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RNF213Q63HN8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
RNF213Q63HN8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC13.04□□□□□ -0.32
RNF213Q63HN8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RNF213Q63HN8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RNF213Q63HN8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RNF213Q63HN8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC13.04□□□□□ -0.32
RNF213Q63HN8 AL359504.2-201ENST00000605506 1601 ntBASIC13.03□□□□□ -0.32
RNF213Q63HN8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF213Q63HN8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC13.03□□□□□ -0.32
RNF213Q63HN8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF213Q63HN8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC13.03□□□□□ -0.32
RNF213Q63HN8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF213Q63HN8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC13.03□□□□□ -0.32
RNF213Q63HN8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
RNF213Q63HN8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF213Q63HN8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RNF213Q63HN8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RNF213Q63HN8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF213Q63HN8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF213Q63HN8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC13.03□□□□□ -0.32
RNF213Q63HN8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF213Q63HN8 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RNF213Q63HN8 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
RNF213Q63HN8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RNF213Q63HN8 AC008687.6-201ENST00000596318 630 ntBASIC13.02□□□□□ -0.32
RNF213Q63HN8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RNF213Q63HN8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RNF213Q63HN8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RNF213Q63HN8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RNF213Q63HN8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC13.01□□□□□ -0.33
RNF213Q63HN8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RNF213Q63HN8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RNF213Q63HN8 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.01□□□□□ -0.33
RNF213Q63HN8 AC104771.1-201ENST00000603335 964 ntBASIC13.01□□□□□ -0.33
RNF213Q63HN8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RNF213Q63HN8 WHAMMP3-201ENST00000611636 1609 ntBASIC13.01□□□□□ -0.33
RNF213Q63HN8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RNF213Q63HN8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC13□□□□□ -0.33
RNF213Q63HN8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC13□□□□□ -0.33
RNF213Q63HN8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC13□□□□□ -0.33
RNF213Q63HN8 SRD5A1P1-201ENST00000442297 786 ntBASIC13□□□□□ -0.33
RNF213Q63HN8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RNF213Q63HN8 CD72-202ENST00000378430 585 ntTSL 3 BASIC12.99□□□□□ -0.33
RNF213Q63HN8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
RNF213Q63HN8 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC12.99□□□□□ -0.33
RNF213Q63HN8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RNF213Q63HN8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RNF213Q63HN8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC12.99□□□□□ -0.33
RNF213Q63HN8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RNF213Q63HN8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC12.99□□□□□ -0.33
RNF213Q63HN8 MAP2K4P1-201ENST00000438453 1195 ntBASIC12.99□□□□□ -0.33
RNF213Q63HN8 AC027682.1-201ENST00000562846 899 ntBASIC12.99□□□□□ -0.33
RNF213Q63HN8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms