Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.02
COL13A1Q5TAT6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
COL13A1Q5TAT6 AC004448.1-201ENST00000458332 883 ntBASIC27.7■■■□□ 2.02
COL13A1Q5TAT6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC27.7■■■□□ 2.02
COL13A1Q5TAT6 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
COL13A1Q5TAT6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
COL13A1Q5TAT6 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
COL13A1Q5TAT6 SRD5A1P1-201ENST00000442297 786 ntBASIC27.69■■■□□ 2.02
COL13A1Q5TAT6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC27.69■■■□□ 2.02
COL13A1Q5TAT6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
COL13A1Q5TAT6 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
COL13A1Q5TAT6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.68■■■□□ 2.02
COL13A1Q5TAT6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
COL13A1Q5TAT6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
COL13A1Q5TAT6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC27.68■■■□□ 2.02
COL13A1Q5TAT6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
COL13A1Q5TAT6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
COL13A1Q5TAT6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC27.67■■■□□ 2.02
COL13A1Q5TAT6 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
COL13A1Q5TAT6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC27.65■■■□□ 2.02
COL13A1Q5TAT6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
COL13A1Q5TAT6 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC27.65■■■□□ 2.02
COL13A1Q5TAT6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.64■■■□□ 2.02
COL13A1Q5TAT6 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL13A1Q5TAT6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC27.64■■■□□ 2.02
COL13A1Q5TAT6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC27.64■■■□□ 2.02
COL13A1Q5TAT6 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
COL13A1Q5TAT6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
COL13A1Q5TAT6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
COL13A1Q5TAT6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
COL13A1Q5TAT6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC27.63■■■□□ 2.01
COL13A1Q5TAT6 AP002414.2-202ENST00000590929 1450 ntBASIC27.63■■■□□ 2.01
COL13A1Q5TAT6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
COL13A1Q5TAT6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC27.62■■■□□ 2.01
COL13A1Q5TAT6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
COL13A1Q5TAT6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
COL13A1Q5TAT6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC27.62■■■□□ 2.01
COL13A1Q5TAT6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
COL13A1Q5TAT6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC27.61■■■□□ 2.01
COL13A1Q5TAT6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC27.61■■■□□ 2.01
COL13A1Q5TAT6 AL031602.1-201ENST00000633169 911 ntBASIC27.61■■■□□ 2.01
COL13A1Q5TAT6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
COL13A1Q5TAT6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC27.6■■■□□ 2.01
COL13A1Q5TAT6 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.59■■■□□ 2.01
COL13A1Q5TAT6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC27.59■■■□□ 2.01
COL13A1Q5TAT6 MIR4767-201ENST00000582827 78 ntBASIC27.59■■■□□ 2.01
COL13A1Q5TAT6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
COL13A1Q5TAT6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC27.59■■■□□ 2.01
COL13A1Q5TAT6 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
COL13A1Q5TAT6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC27.58■■■□□ 2.01
COL13A1Q5TAT6 GXYLT1P5-201ENST00000614548 1189 ntBASIC27.58■■■□□ 2.01
COL13A1Q5TAT6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC27.58■■■□□ 2.01
COL13A1Q5TAT6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
COL13A1Q5TAT6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
COL13A1Q5TAT6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
COL13A1Q5TAT6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC27.57■■■□□ 2
COL13A1Q5TAT6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
COL13A1Q5TAT6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC27.57■■■□□ 2
COL13A1Q5TAT6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC27.57■■■□□ 2
COL13A1Q5TAT6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
COL13A1Q5TAT6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC27.57■■■□□ 2
COL13A1Q5TAT6 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
COL13A1Q5TAT6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC27.56■■■□□ 2
COL13A1Q5TAT6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
COL13A1Q5TAT6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC27.56■■■□□ 2
COL13A1Q5TAT6 DUX4L2-201ENST00000561772 1275 ntBASIC27.56■■■□□ 2
COL13A1Q5TAT6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC27.56■■■□□ 2
COL13A1Q5TAT6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC27.56■■■□□ 2
COL13A1Q5TAT6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC27.56■■■□□ 2
COL13A1Q5TAT6 DUX4L6-201ENST00000626483 1275 ntBASIC27.56■■■□□ 2
COL13A1Q5TAT6 DUX4L1-201ENST00000627662 1275 ntBASIC27.56■■■□□ 2
COL13A1Q5TAT6 DUX4L8-201ENST00000629013 1275 ntBASIC27.56■■■□□ 2
COL13A1Q5TAT6 DUX4L3-201ENST00000630187 1275 ntBASIC27.56■■■□□ 2
COL13A1Q5TAT6 DUX4L7-201ENST00000630678 1275 ntBASIC27.56■■■□□ 2
COL13A1Q5TAT6 DUX4L5-201ENST00000630834 1275 ntBASIC27.56■■■□□ 2
COL13A1Q5TAT6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
COL13A1Q5TAT6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC27.56■■■□□ 2
COL13A1Q5TAT6 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
COL13A1Q5TAT6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
COL13A1Q5TAT6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
COL13A1Q5TAT6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC27.55■■■□□ 2
COL13A1Q5TAT6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC27.55■■■□□ 2
COL13A1Q5TAT6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC27.55■■■□□ 2
COL13A1Q5TAT6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC27.55■■■□□ 2
COL13A1Q5TAT6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC27.55■■■□□ 2
COL13A1Q5TAT6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC27.55■■■□□ 2
COL13A1Q5TAT6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC27.55■■■□□ 2
COL13A1Q5TAT6 AK1-201ENST00000223836 736 ntTSL 3 BASIC27.54■■■□□ 2
COL13A1Q5TAT6 AC027682.1-201ENST00000562846 899 ntBASIC27.54■■■□□ 2
COL13A1Q5TAT6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
COL13A1Q5TAT6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
COL13A1Q5TAT6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
COL13A1Q5TAT6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC27.53■■■□□ 2
COL13A1Q5TAT6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC27.53■■■□□ 2
COL13A1Q5TAT6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC27.53■■■□□ 2
COL13A1Q5TAT6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC27.52■■■□□ 2
COL13A1Q5TAT6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC27.52■■■□□ 2
COL13A1Q5TAT6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
COL13A1Q5TAT6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
COL13A1Q5TAT6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC27.51■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms