Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TBC1D28Q2M2D7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TBC1D28Q2M2D7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TBC1D28Q2M2D7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TBC1D28Q2M2D7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TBC1D28Q2M2D7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.62■□□□□ 0.89
TBC1D28Q2M2D7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.61■□□□□ 0.89
TBC1D28Q2M2D7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D28Q2M2D7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D28Q2M2D7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D28Q2M2D7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D28Q2M2D7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D28Q2M2D7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D28Q2M2D7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D28Q2M2D7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.61■□□□□ 0.89
TBC1D28Q2M2D7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.61■□□□□ 0.89
TBC1D28Q2M2D7 AC074183.2-201ENST00000623112 922 ntBASIC20.61■□□□□ 0.89
TBC1D28Q2M2D7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D28Q2M2D7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D28Q2M2D7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TBC1D28Q2M2D7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TBC1D28Q2M2D7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TBC1D28Q2M2D7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TBC1D28Q2M2D7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TBC1D28Q2M2D7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TBC1D28Q2M2D7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TBC1D28Q2M2D7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.6■□□□□ 0.89
TBC1D28Q2M2D7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TBC1D28Q2M2D7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TBC1D28Q2M2D7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.59■□□□□ 0.89
TBC1D28Q2M2D7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TBC1D28Q2M2D7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.59■□□□□ 0.89
TBC1D28Q2M2D7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.59■□□□□ 0.89
TBC1D28Q2M2D7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TBC1D28Q2M2D7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TBC1D28Q2M2D7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TBC1D28Q2M2D7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.59■□□□□ 0.89
TBC1D28Q2M2D7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.59■□□□□ 0.89
TBC1D28Q2M2D7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TBC1D28Q2M2D7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TBC1D28Q2M2D7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TBC1D28Q2M2D7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TBC1D28Q2M2D7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
TBC1D28Q2M2D7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TBC1D28Q2M2D7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TBC1D28Q2M2D7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TBC1D28Q2M2D7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TBC1D28Q2M2D7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TBC1D28Q2M2D7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
TBC1D28Q2M2D7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D28Q2M2D7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D28Q2M2D7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
TBC1D28Q2M2D7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D28Q2M2D7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TBC1D28Q2M2D7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.56■□□□□ 0.88
TBC1D28Q2M2D7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.56■□□□□ 0.88
TBC1D28Q2M2D7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D28Q2M2D7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TBC1D28Q2M2D7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D28Q2M2D7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D28Q2M2D7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TBC1D28Q2M2D7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TBC1D28Q2M2D7 LONRF2P2-201ENST00000439212 571 ntBASIC20.55■□□□□ 0.88
TBC1D28Q2M2D7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TBC1D28Q2M2D7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TBC1D28Q2M2D7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D28Q2M2D7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.54■□□□□ 0.88
TBC1D28Q2M2D7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.54■□□□□ 0.88
TBC1D28Q2M2D7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D28Q2M2D7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D28Q2M2D7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TBC1D28Q2M2D7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D28Q2M2D7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.53■□□□□ 0.88
TBC1D28Q2M2D7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.53■□□□□ 0.88
TBC1D28Q2M2D7 AC019171.1-201ENST00000601251 1056 ntBASIC20.53■□□□□ 0.88
TBC1D28Q2M2D7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
TBC1D28Q2M2D7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D28Q2M2D7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D28Q2M2D7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D28Q2M2D7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D28Q2M2D7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D28Q2M2D7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D28Q2M2D7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.52■□□□□ 0.88
TBC1D28Q2M2D7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.52■□□□□ 0.88
TBC1D28Q2M2D7 AC010980.1-201ENST00000587192 1142 ntBASIC20.52■□□□□ 0.88
TBC1D28Q2M2D7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D28Q2M2D7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D28Q2M2D7 FOXO3B-201ENST00000395675 1928 ntBASIC20.52■□□□□ 0.88
TBC1D28Q2M2D7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TBC1D28Q2M2D7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TBC1D28Q2M2D7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TBC1D28Q2M2D7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TBC1D28Q2M2D7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TBC1D28Q2M2D7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.52■□□□□ 0.87
TBC1D28Q2M2D7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D28Q2M2D7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TBC1D28Q2M2D7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.51■□□□□ 0.87
TBC1D28Q2M2D7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D28Q2M2D7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.51■□□□□ 0.87
TBC1D28Q2M2D7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms