Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCL20P78556 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCL20P78556 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCL20P78556 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCL20P78556 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCL20P78556 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCL20P78556 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCL20P78556 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCL20P78556 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCL20P78556 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.71■□□□□ 0.59
CCL20P78556 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.71■□□□□ 0.59
CCL20P78556 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCL20P78556 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCL20P78556 LINC00565-201ENST00000562710 2331 ntBASIC18.71■□□□□ 0.58
CCL20P78556 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCL20P78556 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCL20P78556 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CCL20P78556 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCL20P78556 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.7■□□□□ 0.58
CCL20P78556 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCL20P78556 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.7■□□□□ 0.58
CCL20P78556 SLC6A10P-202ENST00000431994 2058 ntBASIC18.7■□□□□ 0.58
CCL20P78556 EP400NL-214ENST00000641289 2402 ntBASIC18.7■□□□□ 0.58
CCL20P78556 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCL20P78556 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.69■□□□□ 0.58
CCL20P78556 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.69■□□□□ 0.58
CCL20P78556 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.69■□□□□ 0.58
CCL20P78556 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.69■□□□□ 0.58
CCL20P78556 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCL20P78556 AL391121.1-201ENST00000607967 1349 ntBASIC18.69■□□□□ 0.58
CCL20P78556 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCL20P78556 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCL20P78556 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCL20P78556 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCL20P78556 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.68■□□□□ 0.58
CCL20P78556 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.68■□□□□ 0.58
CCL20P78556 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCL20P78556 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCL20P78556 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCL20P78556 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCL20P78556 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.67■□□□□ 0.58
CCL20P78556 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CCL20P78556 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.67■□□□□ 0.58
CCL20P78556 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CCL20P78556 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCL20P78556 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCL20P78556 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCL20P78556 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.66■□□□□ 0.58
CCL20P78556 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.66■□□□□ 0.58
CCL20P78556 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.66■□□□□ 0.58
CCL20P78556 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC18.66■□□□□ 0.58
CCL20P78556 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.66■□□□□ 0.58
CCL20P78556 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCL20P78556 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCL20P78556 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCL20P78556 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCL20P78556 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCL20P78556 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL20P78556 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL20P78556 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCL20P78556 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCL20P78556 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL20P78556 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL20P78556 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL20P78556 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL20P78556 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL20P78556 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCL20P78556 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL20P78556 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL20P78556 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCL20P78556 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
CCL20P78556 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.64■□□□□ 0.58
CCL20P78556 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCL20P78556 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL20P78556 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL20P78556 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.64■□□□□ 0.57
CCL20P78556 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL20P78556 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.64■□□□□ 0.57
CCL20P78556 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCL20P78556 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CCL20P78556 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL20P78556 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL20P78556 SETD8P1-201ENST00000623146 1180 ntBASIC18.63■□□□□ 0.57
CCL20P78556 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.63■□□□□ 0.57
CCL20P78556 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL20P78556 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL20P78556 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL20P78556 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL20P78556 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL20P78556 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
CCL20P78556 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL20P78556 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.62■□□□□ 0.57
CCL20P78556 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCL20P78556 AC110285.7-201ENST00000624417 1536 ntBASIC18.62■□□□□ 0.57
CCL20P78556 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCL20P78556 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL20P78556 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.61■□□□□ 0.57
CCL20P78556 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL20P78556 AL024507.2-201ENST00000606070 2574 ntBASIC18.61■□□□□ 0.57
CCL20P78556 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms