Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.98■■□□□ 1.27
CLDN6P56747 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
CLDN6P56747 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLDN6P56747 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
CLDN6P56747 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.98■■□□□ 1.27
CLDN6P56747 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.98■■□□□ 1.27
CLDN6P56747 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.98■■□□□ 1.27
CLDN6P56747 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.98■■□□□ 1.27
CLDN6P56747 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.98■■□□□ 1.27
CLDN6P56747 MIR4466-201ENST00000606121 54 ntBASIC22.98■■□□□ 1.27
CLDN6P56747 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLDN6P56747 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLDN6P56747 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLDN6P56747 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLDN6P56747 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.97■■□□□ 1.27
CLDN6P56747 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.97■■□□□ 1.27
CLDN6P56747 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.97■■□□□ 1.27
CLDN6P56747 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLDN6P56747 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLDN6P56747 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CLDN6P56747 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CLDN6P56747 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.97■■□□□ 1.27
CLDN6P56747 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLDN6P56747 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLDN6P56747 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLDN6P56747 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
CLDN6P56747 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.96■■□□□ 1.27
CLDN6P56747 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CLDN6P56747 AC005837.3-201ENST00000612163 286 ntBASIC22.96■■□□□ 1.27
CLDN6P56747 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLDN6P56747 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLDN6P56747 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLDN6P56747 MIR3621-201ENST00000580529 85 ntBASIC22.95■■□□□ 1.26
CLDN6P56747 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
CLDN6P56747 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.94■■□□□ 1.26
CLDN6P56747 MTDHP2-201ENST00000601468 714 ntBASIC22.94■■□□□ 1.26
CLDN6P56747 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLDN6P56747 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLDN6P56747 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CLDN6P56747 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
CLDN6P56747 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CLDN6P56747 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.93■■□□□ 1.26
CLDN6P56747 LINC01003-201ENST00000564834 1764 ntBASIC22.93■■□□□ 1.26
CLDN6P56747 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CLDN6P56747 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.92■■□□□ 1.26
CLDN6P56747 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
CLDN6P56747 MIR6724-1-201ENST00000616420 92 ntBASIC22.92■■□□□ 1.26
CLDN6P56747 MIR6724-2-201ENST00000616483 92 ntBASIC22.92■■□□□ 1.26
CLDN6P56747 MIR6724-4-201ENST00000617390 92 ntBASIC22.92■■□□□ 1.26
CLDN6P56747 MIR6724-3-201ENST00000622482 92 ntBASIC22.92■■□□□ 1.26
CLDN6P56747 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
CLDN6P56747 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.92■■□□□ 1.26
CLDN6P56747 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CLDN6P56747 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.92■■□□□ 1.26
CLDN6P56747 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CLDN6P56747 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CLDN6P56747 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.91■■□□□ 1.26
CLDN6P56747 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
CLDN6P56747 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
CLDN6P56747 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CLDN6P56747 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CLDN6P56747 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CLDN6P56747 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CLDN6P56747 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
CLDN6P56747 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
CLDN6P56747 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CLDN6P56747 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CLDN6P56747 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
CLDN6P56747 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CLDN6P56747 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CLDN6P56747 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CLDN6P56747 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CLDN6P56747 AL356740.2-201ENST00000601559 647 ntBASIC22.88■■□□□ 1.25
CLDN6P56747 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.88■■□□□ 1.25
CLDN6P56747 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CLDN6P56747 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.87■■□□□ 1.25
CLDN6P56747 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLDN6P56747 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLDN6P56747 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.87■■□□□ 1.25
CLDN6P56747 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
CLDN6P56747 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLDN6P56747 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLDN6P56747 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
CLDN6P56747 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
CLDN6P56747 AC142472.1-201ENST00000612013 1741 ntBASIC22.86■■□□□ 1.25
CLDN6P56747 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.86■■□□□ 1.25
CLDN6P56747 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.86■■□□□ 1.25
CLDN6P56747 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.86■■□□□ 1.25
CLDN6P56747 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.86■■□□□ 1.25
CLDN6P56747 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.86■■□□□ 1.25
CLDN6P56747 AL512631.2-201ENST00000604634 923 ntBASIC22.86■■□□□ 1.25
CLDN6P56747 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.86■■□□□ 1.25
CLDN6P56747 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CLDN6P56747 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CLDN6P56747 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.85■■□□□ 1.25
CLDN6P56747 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
CLDN6P56747 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CLDN6P56747 ZNRF2P3-201ENST00000424200 374 ntBASIC22.84■■□□□ 1.25
CLDN6P56747 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.84■■□□□ 1.25
CLDN6P56747 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms