Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.51■■□□□ 1.19
WNT3P56703 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
WNT3P56703 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.5■■□□□ 1.19
WNT3P56703 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.5■■□□□ 1.19
WNT3P56703 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
WNT3P56703 AP003733.4-201ENST00000623785 1697 ntBASIC22.5■■□□□ 1.19
WNT3P56703 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
WNT3P56703 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
WNT3P56703 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
WNT3P56703 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
WNT3P56703 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
WNT3P56703 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
WNT3P56703 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
WNT3P56703 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.48■■□□□ 1.19
WNT3P56703 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
WNT3P56703 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
WNT3P56703 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
WNT3P56703 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.48■■□□□ 1.19
WNT3P56703 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
WNT3P56703 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.47■■□□□ 1.19
WNT3P56703 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
WNT3P56703 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
WNT3P56703 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.47■■□□□ 1.19
WNT3P56703 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.47■■□□□ 1.19
WNT3P56703 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
WNT3P56703 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.47■■□□□ 1.19
WNT3P56703 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
WNT3P56703 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
WNT3P56703 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
WNT3P56703 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
WNT3P56703 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
WNT3P56703 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
WNT3P56703 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
WNT3P56703 RP9P-202ENST00000450133 1212 ntBASIC22.46■■□□□ 1.19
WNT3P56703 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
WNT3P56703 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.46■■□□□ 1.19
WNT3P56703 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
WNT3P56703 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
WNT3P56703 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
WNT3P56703 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.46■■□□□ 1.19
WNT3P56703 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.19
WNT3P56703 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
WNT3P56703 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.45■■□□□ 1.18
WNT3P56703 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
WNT3P56703 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
WNT3P56703 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
WNT3P56703 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
WNT3P56703 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
WNT3P56703 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
WNT3P56703 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
WNT3P56703 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
WNT3P56703 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
WNT3P56703 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
WNT3P56703 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
WNT3P56703 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
WNT3P56703 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.44■■□□□ 1.18
WNT3P56703 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.44■■□□□ 1.18
WNT3P56703 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
WNT3P56703 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.44■■□□□ 1.18
WNT3P56703 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.44■■□□□ 1.18
WNT3P56703 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
WNT3P56703 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
WNT3P56703 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
WNT3P56703 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.43■■□□□ 1.18
WNT3P56703 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
WNT3P56703 AC093536.1-201ENST00000569153 554 ntBASIC22.43■■□□□ 1.18
WNT3P56703 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
WNT3P56703 LINC01124-201ENST00000409786 2117 ntBASIC22.43■■□□□ 1.18
WNT3P56703 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
WNT3P56703 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
WNT3P56703 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.42■■□□□ 1.18
WNT3P56703 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
WNT3P56703 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
WNT3P56703 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
WNT3P56703 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
WNT3P56703 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
WNT3P56703 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
WNT3P56703 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.42■■□□□ 1.18
WNT3P56703 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.42■■□□□ 1.18
WNT3P56703 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
WNT3P56703 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.42■■□□□ 1.18
WNT3P56703 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
WNT3P56703 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
WNT3P56703 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
WNT3P56703 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
WNT3P56703 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
WNT3P56703 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.4■■□□□ 1.18
WNT3P56703 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
WNT3P56703 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.4■■□□□ 1.18
WNT3P56703 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.4■■□□□ 1.18
WNT3P56703 AC007029.1-201ENST00000604183 313 ntBASIC22.4■■□□□ 1.18
WNT3P56703 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
WNT3P56703 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.39■■□□□ 1.18
WNT3P56703 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
WNT3P56703 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.39■■□□□ 1.17
WNT3P56703 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.39■■□□□ 1.17
WNT3P56703 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
WNT3P56703 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
WNT3P56703 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
WNT3P56703 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms