Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 TDA6YPR157W 1404 nt6.98□□□□□ -1.29
RPN11P43588 PHO8YDR481C 1701 nt6.97□□□□□ -1.29
RPN11P43588 DMA1YHR115C 1251 nt6.97□□□□□ -1.29
RPN11P43588 LYS12YIL094C 1116 nt6.97□□□□□ -1.29
RPN11P43588 ECM27YJR106W 2178 nt6.97□□□□□ -1.29
RPN11P43588 POM33YLL023C 840 nt6.97□□□□□ -1.29
RPN11P43588 PUS5YLR165C 765 nt6.97□□□□□ -1.29
RPN11P43588 SEC20YDR498C 1152 nt6.96□□□□□ -1.3
RPN11P43588 SPC34YKR037C 888 nt6.96□□□□□ -1.3
RPN11P43588 RPS15YOL040C 429 nt6.96□□□□□ -1.3
RPN11P43588 TEP1YNL128W 1305 nt6.96□□□□□ -1.3
RPN11P43588 PXR1YGR280C 816 nt6.94□□□□□ -1.3
RPN11P43588 YML082WYML082W 1950 nt6.94□□□□□ -1.3
RPN11P43588 YPR204WYPR204W 3099 nt6.93□□□□□ -1.3
RPN11P43588 YDR278CYDR278C 318 nt6.93□□□□□ -1.3
RPN11P43588 HSP12YFL014W 330 nt6.93□□□□□ -1.3
RPN11P43588 VAM7YGL212W 951 nt6.93□□□□□ -1.3
RPN11P43588 COX18YGR062C 951 nt6.93□□□□□ -1.3
RPN11P43588 TDH3YGR192C 999 nt6.93□□□□□ -1.3
RPN11P43588 YMR253CYMR253C 1245 nt6.93□□□□□ -1.3
RPN11P43588 IDP3YNL009W 1263 nt6.93□□□□□ -1.3
RPN11P43588 YNL165WYNL165W 1221 nt6.93□□□□□ -1.3
RPN11P43588 LAS21YJL062W 2493 nt6.93□□□□□ -1.3
RPN11P43588 DPH2YKL191W 1605 nt6.93□□□□□ -1.3
RPN11P43588 OPI8YKR035C 642 nt6.92□□□□□ -1.3
RPN11P43588 SES1YDR023W 1389 nt6.92□□□□□ -1.3
RPN11P43588 YMR111CYMR111C 1389 nt6.92□□□□□ -1.3
RPN11P43588 THI21YPL258C 1656 nt6.91□□□□□ -1.3
RPN11P43588 YER010CYER010C 705 nt6.91□□□□□ -1.3
RPN11P43588 NPA3YJR072C 1158 nt6.91□□□□□ -1.3
RPN11P43588 SHE10YGL228W 1734 nt6.9□□□□□ -1.3
RPN11P43588 YDR134CYDR134C 411 nt6.9□□□□□ -1.3
RPN11P43588 GUT1YHL032C 2130 nt6.9□□□□□ -1.3
RPN11P43588 YUR1YJL139C 1287 nt6.9□□□□□ -1.3
RPN11P43588 PGA3YML125C 939 nt6.9□□□□□ -1.3
RPN11P43588 REC114YMR133W 1287 nt6.9□□□□□ -1.3
RPN11P43588 KDX1YKL161C 1302 nt6.9□□□□□ -1.3
RPN11P43588 VPS70YJR126C 2436 nt6.89□□□□□ -1.31
RPN11P43588 AI5_BETAQ0075 1065 nt6.89□□□□□ -1.31
RPN11P43588 BUD28YLR062C 378 nt6.89□□□□□ -1.31
RPN11P43588 ARO7YPR060C 771 nt6.89□□□□□ -1.31
RPN11P43588 BNA3YJL060W 1335 nt6.89□□□□□ -1.31
RPN11P43588 GCD11YER025W 1584 nt6.89□□□□□ -1.31
RPN11P43588 VPS1YKR001C 2115 nt6.89□□□□□ -1.31
RPN11P43588 LCP5YER127W 1074 nt6.88□□□□□ -1.31
RPN11P43588 FHN1YGR131W 525 nt6.88□□□□□ -1.31
RPN11P43588 PDR18YNR070W 4002 nt6.88□□□□□ -1.31
RPN11P43588 YME1YPR024W 2244 nt6.87□□□□□ -1.31
RPN11P43588 RMA1YKL132C 1293 nt6.87□□□□□ -1.31
RPN11P43588 PRE7YBL041W 726 nt6.87□□□□□ -1.31
RPN11P43588 YRF1-4YLR466W 4149 nt6.86□□□□□ -1.31
RPN11P43588 PET112YBL080C 1626 nt6.86□□□□□ -1.31
RPN11P43588 CRP1YHR146W 1398 nt6.85□□□□□ -1.31
RPN11P43588 POB3YML069W 1659 nt6.85□□□□□ -1.31
RPN11P43588 VPS61YDR136C 573 nt6.85□□□□□ -1.31
RPN11P43588 YJL068CYJL068C 900 nt6.85□□□□□ -1.31
RPN11P43588 YNR040WYNR040W 771 nt6.85□□□□□ -1.31
RPN11P43588 MGR2YPL098C 342 nt6.85□□□□□ -1.31
RPN11P43588 ALT1YLR089C 1779 nt6.85□□□□□ -1.31
RPN11P43588 TUB2YFL037W 1374 nt6.84□□□□□ -1.31
RPN11P43588 TOS4YLR183C 1470 nt6.84□□□□□ -1.31
RPN11P43588 ECM38YLR299W 1983 nt6.84□□□□□ -1.32
RPN11P43588 HAP2YGL237C 798 nt6.83□□□□□ -1.32
RPN11P43588 RPP0YLR340W 939 nt6.83□□□□□ -1.32
RPN11P43588 YKR023WYKR023W 1593 nt6.82□□□□□ -1.32
RPN11P43588 ICE2YIL090W 1476 nt6.82□□□□□ -1.32
RPN11P43588 GCS1YDL226C 1059 nt6.82□□□□□ -1.32
RPN11P43588 YDR053WYDR053W 396 nt6.82□□□□□ -1.32
RPN11P43588 PRP45YAL032C 1140 nt6.82□□□□□ -1.32
RPN11P43588 RER2YBR002C 861 nt6.82□□□□□ -1.32
RPN11P43588 YPS7YDR349C 1791 nt6.82□□□□□ -1.32
RPN11P43588 EFM1YHL039W 1758 nt6.82□□□□□ -1.32
RPN11P43588 WTM1YOR230W 1314 nt6.81□□□□□ -1.32
RPN11P43588 RAD3YER171W 2337 nt6.81□□□□□ -1.32
RPN11P43588 STF1YDL130W-A 261 nt6.81□□□□□ -1.32
RPN11P43588 BNS1YGR230W 414 nt6.81□□□□□ -1.32
RPN11P43588 CBF1YJR060W 1056 nt6.81□□□□□ -1.32
RPN11P43588 SEC23YPR181C 2307 nt6.81□□□□□ -1.32
RPN11P43588 SUA5YGL169W 1281 nt6.8□□□□□ -1.32
RPN11P43588 CAB4YGR277C 918 nt6.8□□□□□ -1.32
RPN11P43588 BUL1YMR275C 2931 nt6.8□□□□□ -1.32
RPN11P43588 RPT1YKL145W 1404 nt6.79□□□□□ -1.32
RPN11P43588 YDR133CYDR133C 336 nt6.79□□□□□ -1.32
RPN11P43588 RME1YGR044C 903 nt6.79□□□□□ -1.32
RPN11P43588 DUS4YLR405W 1104 nt6.79□□□□□ -1.32
RPN11P43588 YHR045WYHR045W 1683 nt6.79□□□□□ -1.32
RPN11P43588 NOP8YOL144W 1455 nt6.79□□□□□ -1.32
RPN11P43588 TRK2YKR050W 2670 nt6.78□□□□□ -1.32
RPN11P43588 GGC1YDL198C 903 nt6.78□□□□□ -1.32
RPN11P43588 SUP2tY(GUA)D 75 nt6.78□□□□□ -1.32
RPN11P43588 SUP11tY(GUA)F1 75 nt6.78□□□□□ -1.32
RPN11P43588 SUP6tY(GUA)F2 75 nt6.78□□□□□ -1.32
RPN11P43588 SUP7tY(GUA)J1 75 nt6.78□□□□□ -1.32
RPN11P43588 SUP4tY(GUA)J2 75 nt6.78□□□□□ -1.32
RPN11P43588 SUP5tY(GUA)M1 75 nt6.78□□□□□ -1.32
RPN11P43588 SUP8tY(GUA)M2 75 nt6.78□□□□□ -1.32
RPN11P43588 SUP3tY(GUA)O 75 nt6.78□□□□□ -1.32
RPN11P43588 STM1YLR150W 822 nt6.78□□□□□ -1.32
RPN11P43588 FEX1YOR390W 1128 nt6.78□□□□□ -1.32
RPN11P43588 FEX2YPL279C 1128 nt6.78□□□□□ -1.32
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms