Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.411e-6■■■■■ 29
MATR3P43243 ZNF780A-211ENST00000601715 446 ntTSL 25.76□□□□□ -1.491e-6■■■■■ 29
MATR3P43243 ZNF780A-208ENST00000599368 665 ntTSL 25.56□□□□□ -1.521e-6■■■■■ 29
MATR3P43243 ZNF780A-210ENST00000601688 467 ntTSL 1 (best)3.95□□□□□ -1.781e-6■■■■■ 29
MATR3P43243 SPATS2L-216ENST00000444012 605 ntTSL 420.69■□□□□ 0.93e-7■■■■■ 29
MATR3P43243 SPATS2L-211ENST00000423749 771 ntTSL 519.72■□□□□ 0.753e-7■■■■■ 29
MATR3P43243 SPATS2L-214ENST00000439084 584 ntTSL 315.46■□□□□ 0.073e-7■■■■■ 29
MATR3P43243 SPATS2L-215ENST00000439395 561 ntTSL 46.05□□□□□ -1.443e-7■■■■■ 29
MATR3P43243 CEP152-209ENST00000560322 1947 ntAPPRIS ALT2 TSL 1 (best)15.62■□□□□ 0.094e-8■■■■■ 28.9
MATR3P43243 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.664e-8■■■■■ 28.9
MATR3P43243 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.164e-8■■■■■ 28.9
MATR3P43243 CEP152-206ENST00000559398 591 ntTSL 26.23□□□□□ -1.414e-8■■■■■ 28.9
MATR3P43243 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.624e-8■■■■■ 28.9
MATR3P43243 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.34□□□□□ -1.552e-7■■■■■ 28.9
MATR3P43243 SPTLC3-204ENST00000450297 645 ntTSL 310.57□□□□□ -0.729e-11■■■■■ 28.9
MATR3P43243 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.869e-11■■■■■ 28.9
MATR3P43243 SPTLC3-203ENST00000434210 572 ntTSL 37.68□□□□□ -1.189e-11■■■■■ 28.9
MATR3P43243 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.43■■□□□ 1.981e-6■■■■■ 28.9
MATR3P43243 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.1■■□□□ 1.931e-6■■■■■ 28.9
MATR3P43243 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.811e-6■■■■■ 28.9
MATR3P43243 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.791e-6■■■■■ 28.9
MATR3P43243 OTUD5-205ENST00000455452 2077 ntTSL 522.43■■□□□ 1.181e-6■■■■■ 28.9
MATR3P43243 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.81■□□□□ 0.61e-6■■■■■ 28.9
MATR3P43243 OTUD5-207ENST00000484499 924 ntTSL 510.31□□□□□ -0.761e-6■■■■■ 28.9
MATR3P43243 TBC1D5-228ENST00000486224 526 ntTSL 36.47□□□□□ -1.377e-8■■■■■ 28.9
MATR3P43243 DGCR8-209ENST00000495826 4695 ntTSL 1 (best)15.7■□□□□ 0.17e-7■■■■■ 28.9
MATR3P43243 DGCR8-203ENST00000407755 4129 ntTSL 1 (best) BASIC13.3□□□□□ -0.287e-7■■■■■ 28.9
MATR3P43243 DGCR8-210ENST00000498171 3661 ntTSL 1 (best)12.92□□□□□ -0.347e-7■■■■■ 28.9
MATR3P43243 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.21e-6■■■■■ 28.9
MATR3P43243 CNOT3-210ENST00000618939 4516 ntTSL 515.71■□□□□ 0.111e-6■■■■■ 28.9
MATR3P43243 KEL-208ENST00000479768 1856 ntTSL 514.55□□□□□ -0.084e-7■■■■■ 28.8
MATR3P43243 KEL-201ENST00000355265 2812 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.834e-7■■■■■ 28.8
MATR3P43243 CUL3-207ENST00000451538 546 ntTSL 57.03□□□□□ -1.287e-7■■■■■ 28.8
MATR3P43243 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.96□□□□□ -1.627e-7■■■■■ 28.8
MATR3P43243 CUL3-208ENST00000454323 688 ntTSL 34.94□□□□□ -1.627e-7■■■■■ 28.8
MATR3P43243 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.963e-6■■■■■ 28.8
MATR3P43243 PROS1-201ENST00000348974 806 ntTSL 520.37■□□□□ 0.852e-10■■■■■ 28.8
MATR3P43243 MROH1-206ENST00000528664 686 ntTSL 320.17■□□□□ 0.826e-8■■■■■ 28.8
MATR3P43243 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.793e-6■■■■■ 28.8
MATR3P43243 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.65■□□□□ 0.746e-8■■■■■ 28.8
MATR3P43243 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.76e-8■■■■■ 28.8
MATR3P43243 MAPK8-210ENST00000432379 907 ntTSL 319.14■□□□□ 0.651e-6■■■■■ 28.8
MATR3P43243 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.573e-6■■■■■ 28.8
MATR3P43243 IDS-206ENST00000466323 1529 ntTSL 1 (best)18.09■□□□□ 0.496e-8■■■■■ 28.8
MATR3P43243 FAM126B-205ENST00000453765 536 ntTSL 418■□□□□ 0.476e-8■■■■■ 28.8
MATR3P43243 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.46e-8■■■■■ 28.8
MATR3P43243 FAM126B-208ENST00000485636 530 ntTSL 417.5■□□□□ 0.396e-8■■■■■ 28.8
MATR3P43243 MAPK8-208ENST00000426557 860 ntTSL 416.39■□□□□ 0.211e-6■■■■■ 28.8
MATR3P43243 FAM126B-203ENST00000446678 522 ntTSL 315.55■□□□□ 0.086e-8■■■■■ 28.8
MATR3P43243 USO1-201ENST00000264904 4135 ntTSL 2 BASIC15.28■□□□□ 0.046e-8■■■■■ 28.8
MATR3P43243 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.046e-8■■■■■ 28.8
MATR3P43243 AC244197.3-204ENST00000427113 906 ntTSL 314.78□□□□□ -0.046e-8■■■■■ 28.8
MATR3P43243 IDS-203ENST00000428056 1213 ntTSL 2 BASIC14.37□□□□□ -0.116e-8■■■■■ 28.8
MATR3P43243 IDS-201ENST00000340855 7619 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.156e-8■■■■■ 28.8
MATR3P43243 PARGP1-201ENST00000417555 2286 ntBASIC13.89□□□□□ -0.196e-8■■■■■ 28.8
MATR3P43243 PROS1-202ENST00000394236 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.192e-10■■■■■ 28.8
MATR3P43243 FAM126B-206ENST00000474118 771 ntTSL 313.78□□□□□ -0.26e-8■■■■■ 28.8
MATR3P43243 USP40-205ENST00000430158 1047 ntTSL 313.51□□□□□ -0.256e-8■■■■■ 28.8
MATR3P43243 IDS-208ENST00000521702 572 ntTSL 513.39□□□□□ -0.276e-8■■■■■ 28.8
MATR3P43243 FRY-202ENST00000380250 10688 ntTSL 5 BASIC12.66□□□□□ -0.386e-8■■■■■ 28.8
MATR3P43243 FRY-209ENST00000642040 10697 ntBASIC12.66□□□□□ -0.386e-8■■■■■ 28.8
MATR3P43243 USO1-204ENST00000514213 4034 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.396e-8■■■■■ 28.8
MATR3P43243 FAM126B-201ENST00000286181 4778 ntTSL 1 (best)12.53□□□□□ -0.46e-8■■■■■ 28.8
MATR3P43243 MAPK8-207ENST00000395611 5844 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.411e-6■■■■■ 28.8
MATR3P43243 MAPK8-206ENST00000374189 5796 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.51e-6■■■■■ 28.8
MATR3P43243 MAPK8-209ENST00000429041 603 ntTSL 511.17□□□□□ -0.621e-6■■■■■ 28.8
MATR3P43243 AC244197.3-202ENST00000441880 416 ntTSL 211.04□□□□□ -0.646e-8■■■■■ 28.8
MATR3P43243 HSD17B2-201ENST00000199936 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.726e-8■■■■■ 28.8
MATR3P43243 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.846e-8■■■■■ 28.8
MATR3P43243 HSD17B2-205ENST00000568090 865 ntTSL 39.71□□□□□ -0.866e-8■■■■■ 28.8
MATR3P43243 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC9.5□□□□□ -0.896e-8■■■■■ 28.8
MATR3P43243 FAM126B-211ENST00000498780 2209 ntTSL 29.39□□□□□ -0.916e-8■■■■■ 28.8
MATR3P43243 AL137782.1-201ENST00000563635 4128 ntTSL 5 BASIC9.01□□□□□ -0.975e-7■■■■■ 28.8
MATR3P43243 ZNF107-202ENST00000360117 1061 ntTSL 1 (best)8.91□□□□□ -0.986e-8■■■■■ 28.8
MATR3P43243 AC244197.3-203ENST00000523759 742 ntTSL 38.8□□□□□ -16e-8■■■■■ 28.8
MATR3P43243 HSD17B2-204ENST00000566838 7925 ntTSL 28.57□□□□□ -1.046e-8■■■■■ 28.8
MATR3P43243 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC8.3□□□□□ -1.086e-8■■■■■ 28.8
MATR3P43243 FRY-204ENST00000436046 691 ntTSL 57.74□□□□□ -1.176e-8■■■■■ 28.8
MATR3P43243 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.85□□□□□ -1.316e-8■■■■■ 28.8
MATR3P43243 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.76□□□□□ -1.336e-8■■■■■ 28.8
MATR3P43243 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.46e-8■■■■■ 28.8
MATR3P43243 RNF128-203ENST00000418562 839 ntTSL 56.02□□□□□ -1.456e-8■■■■■ 28.8
MATR3P43243 FAM126B-204ENST00000452799 692 ntTSL 35.55□□□□□ -1.526e-8■■■■■ 28.8
MATR3P43243 LPP-212ENST00000462758 564 ntTSL 45.48□□□□□ -1.536e-8■■■■■ 28.8
MATR3P43243 USP40-213ENST00000483216 641 ntTSL 45.36□□□□□ -1.556e-8■■■■■ 28.8
MATR3P43243 PROS1-204ENST00000472684 562 ntTSL 54.96□□□□□ -1.622e-10■■■■■ 28.8
MATR3P43243 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.666e-8■■■■■ 28.8
MATR3P43243 LMBR1-216ENST00000477983 605 ntTSL 24.67□□□□□ -1.666e-8■■■■■ 28.8
MATR3P43243 MAPK8-215ENST00000476134 732 ntTSL 34.52□□□□□ -1.691e-6■■■■■ 28.8
MATR3P43243 ASXL2-204ENST00000497092 549 ntTSL 24.43□□□□□ -1.76e-8■■■■■ 28.8
MATR3P43243 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.54□□□□□ -1.846e-8■■■■■ 28.8
MATR3P43243 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.36□□□□□ -1.872e-10■■■■■ 28.8
MATR3P43243 ARHGAP17-202ENST00000303665 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.358e-7■■■■■ 28.8
MATR3P43243 ARHGAP17-201ENST00000289968 3461 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.478e-7■■■■■ 28.8
MATR3P43243 ARHGAP17-219ENST00000575975 681 ntTSL 1 (best)7.37□□□□□ -1.238e-7■■■■■ 28.8
MATR3P43243 CIT-202ENST00000392520 5205 ntTSL 517.18■□□□□ 0.342e-8■■■■■ 28.8
MATR3P43243 CIT-210ENST00000539413 554 ntTSL 417.13■□□□□ 0.332e-8■■■■■ 28.8
MATR3P43243 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC14.36□□□□□ -0.112e-8■■■■■ 28.8
MATR3P43243 CIT-217ENST00000545913 8520 ntTSL 513.7□□□□□ -0.222e-8■■■■■ 28.8
MATR3P43243 PPP1R12B-201ENST00000290419 2227 ntTSL 1 (best) BASIC12.86□□□□□ -0.352e-8■■■■■ 28.8
Retrieved 100 of 16,209 protein–RNA pairs in 536.5 ms