RNA–Protein interactions for RNA: ENST00000451538.1

CUL3-207, Transcript of cullin 3, humanhuman

TSL 5

Gene CUL3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-207ENST00000451538 AEBP2Q6ZN18 517 aaPredicted RBP31.89■■■□□ 2.7
CUL3-207ENST00000451538 CHIC1Q5VXU3 224 aa30.05■■■□□ 2.4
CUL3-207ENST00000451538 SENP3Q9H4L4 574 aaPredicted RBP27.29■■□□□ 1.96
CUL3-207ENST00000451538 PHF23Q9BUL5 403 aaPredicted RBP26.89■■□□□ 1.9
CUL3-207ENST00000451538 FOXD1Q16676 465 aa25.45■■□□□ 1.66
CUL3-207ENST00000451538 MSH5O43196 834 aa23.95■■□□□ 1.42
CUL3-207ENST00000451538 PLPPR3Q6T4P5 718 aa23.9■■□□□ 1.42
CUL3-207ENST00000451538 POTEDQ86YR6 584 aa23.82■■□□□ 1.4
CUL3-207ENST00000451538 PIAS4Q8N2W9 510 aaPredicted RBP23.71■■□□□ 1.39
CUL3-207ENST00000451538 PPP6R1Q9UPN7 881 aa23.57■■□□□ 1.36
CUL3-207ENST00000451538 ADRA2BP18089 450 aa23.48■■□□□ 1.35
CUL3-207ENST00000451538 MAPK8IP2Q13387 824 aaPredicted RBP21.64■■□□□ 1.05
CUL3-207ENST00000451538 DMRT2Q9Y5R5 561 aa21.59■■□□□ 1.05
CUL3-207ENST00000451538 SCAF1Q9H7N4 1312 aaKnown RBP21.55■■□□□ 1.04
CUL3-207ENST00000451538 PPP4R3CPQ6ZMV5 832 aa20.9■□□□□ 0.94
CUL3-207ENST00000451538 CACNB1Q02641 598 aaPredicted RBP20.71■□□□□ 0.91
CUL3-207ENST00000451538 DCAF8L1A6NGE4 600 aa20.7■□□□□ 0.9
CUL3-207ENST00000451538 HOXD11P31277 338 aaPredicted RBP20.7■□□□□ 0.9
CUL3-207ENST00000451538 CNKSR2Q8WXI2 1034 aa20.59■□□□□ 0.89
CUL3-207ENST00000451538 KCNA4P22459 653 aa20.53■□□□□ 0.88
CUL3-207ENST00000451538 RNF216Q9NWF9 866 aaPredicted RBP20.47■□□□□ 0.87
CUL3-207ENST00000451538 RNF39Q9H2S5 420 aa20.4■□□□□ 0.86
CUL3-207ENST00000451538 EHMT2Q96KQ7 1210 aa20.17■□□□□ 0.82
CUL3-207ENST00000451538 C1QBPQ07021 282 aaKnown RBP20.11■□□□□ 0.81
CUL3-207ENST00000451538 DNAJC5BQ9UF47 199 aa20.08■□□□□ 0.81
CUL3-207ENST00000451538 NCBP3Q53F19 620 aaKnown RBP20.04■□□□□ 0.8
CUL3-207ENST00000451538 SLC4A1APQ9BWU0 796 aaKnown RBP19.74■□□□□ 0.75
CUL3-207ENST00000451538 NPM3O75607 178 aaKnown RBP19.71■□□□□ 0.75
CUL3-207ENST00000451538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.71■□□□□ 0.75
CUL3-207ENST00000451538 CSRNP3Q8WYN3 585 aa19.42■□□□□ 0.7
CUL3-207ENST00000451538 U3KPZ7 1027 aaPredicted RBP19.25■□□□□ 0.67
CUL3-207ENST00000451538 CAPN15O75808 1086 aa19.05■□□□□ 0.64
CUL3-207ENST00000451538 SPINK5Q9NQ38 1064 aaPredicted RBP19.05■□□□□ 0.64
CUL3-207ENST00000451538 DSG3P32926 999 aa19.01■□□□□ 0.63
CUL3-207ENST00000451538 SLC4A2P04920 1241 aa18.9■□□□□ 0.62
CUL3-207ENST00000451538 ZBTB22O15209 634 aa18.87■□□□□ 0.61
CUL3-207ENST00000451538 APLP2Q06481 763 aa18.74■□□□□ 0.59
CUL3-207ENST00000451538 FOXD4L1Q9NU39 408 aa18.7■□□□□ 0.58
CUL3-207ENST00000451538 TRHP20396 242 aaPredicted RBP18.67■□□□□ 0.58
CUL3-207ENST00000451538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.66■□□□□ 0.58
CUL3-207ENST00000451538 HNRNPUL2Q1KMD3 747 aaKnown RBP18.66■□□□□ 0.58
CUL3-207ENST00000451538 ZNF219Q9P2Y4 722 aaPredicted RBP18.65■□□□□ 0.58
CUL3-207ENST00000451538 POTEHQ6S545 545 aa18.62■□□□□ 0.57
CUL3-207ENST00000451538 ABCB7O75027 752 aa18.56■□□□□ 0.56
CUL3-207ENST00000451538 SAMD1Q6SPF0 538 aaPredicted RBP18.52■□□□□ 0.56
CUL3-207ENST00000451538 MYCNP04198 464 aaPredicted RBP18.26■□□□□ 0.51
CUL3-207ENST00000451538 RBM42Q9BTD8 480 aaKnown RBP18.17■□□□□ 0.5
CUL3-207ENST00000451538 POLA2Q14181 598 aa18.12■□□□□ 0.49
CUL3-207ENST00000451538 ATXN8OSP0DMR3 200 aa17.92■□□□□ 0.46
CUL3-207ENST00000451538 CHRDL2Q6WN34 429 aa17.86■□□□□ 0.45
CUL3-207ENST00000451538 ATF5Q9Y2D1 282 aaPredicted RBP17.82■□□□□ 0.44
CUL3-207ENST00000451538 ZBTB12Q9Y330 459 aaPredicted RBP17.75■□□□□ 0.43
CUL3-207ENST00000451538 AKT1S1Q96B36 256 aa17.69■□□□□ 0.42
CUL3-207ENST00000451538 FKBP8Q14318 412 aa17.61■□□□□ 0.41
CUL3-207ENST00000451538 OSCARQ8IYS5 282 aa17.52■□□□□ 0.4
CUL3-207ENST00000451538 REM2Q8IYK8 340 aaPredicted RBP17.5■□□□□ 0.39
CUL3-207ENST00000451538 AMER1Q5JTC6 1135 aaPredicted RBP17.44■□□□□ 0.38
CUL3-207ENST00000451538 RTN4Q9NQC3 1192 aaKnown RBP17.39■□□□□ 0.37
CUL3-207ENST00000451538 PIP4P2Q8N4L2 257 aa17.36■□□□□ 0.37
CUL3-207ENST00000451538 SP7Q8TDD2 431 aaPredicted RBP17.33■□□□□ 0.36
CUL3-207ENST00000451538 PITPNM1O00562 1244 aa17.3■□□□□ 0.36
CUL3-207ENST00000451538 FXR2P51116 673 aaKnown RBP eCLIP17.24■□□□□ 0.35
CUL3-207ENST00000451538 FBLN2P98095 1184 aa17.19■□□□□ 0.34
CUL3-207ENST00000451538 SPDYE2BA6NHP3 402 aa17.18■□□□□ 0.34
CUL3-207ENST00000451538 SPDYE6P0CI01 402 aa17.18■□□□□ 0.34
CUL3-207ENST00000451538 SPDYE2Q495Y8 402 aa17.18■□□□□ 0.34
CUL3-207ENST00000451538 HAX1O00165 279 aa17.14■□□□□ 0.33
CUL3-207ENST00000451538 SLC24A1O60721 1099 aa17.06■□□□□ 0.32
CUL3-207ENST00000451538 MKRN4PQ13434 485 aaPredicted RBP16.99■□□□□ 0.31
CUL3-207ENST00000451538 SPDYE1Q8NFV5 336 aaPredicted RBP16.94■□□□□ 0.3
CUL3-207ENST00000451538 ZNF692Q9BU19 519 aaPredicted RBP16.91■□□□□ 0.3
CUL3-207ENST00000451538 CLEC11AQ9Y240 323 aa16.9■□□□□ 0.3
CUL3-207ENST00000451538 SSUH2Q9Y2M2 353 aa16.9■□□□□ 0.3
CUL3-207ENST00000451538 EVX2Q03828 476 aa16.88■□□□□ 0.29
CUL3-207ENST00000451538 PRKAR2AP13861 404 aaKnown RBP16.87■□□□□ 0.29
CUL3-207ENST00000451538 SPDYE4A6NLX3 237 aa16.8■□□□□ 0.28
CUL3-207ENST00000451538 FBXO3Q9UK99 471 aa16.75■□□□□ 0.27
CUL3-207ENST00000451538 C19orf67A6NJJ6 358 aa16.69■□□□□ 0.26
CUL3-207ENST00000451538 PABPN1Q86U42 306 aaKnown RBP eCLIP16.65■□□□□ 0.26
CUL3-207ENST00000451538 PRR29P0C7W0 189 aa16.61■□□□□ 0.25
CUL3-207ENST00000451538 CHADLQ6NUI6 762 aa16.6■□□□□ 0.25
CUL3-207ENST00000451538 PROM2Q8N271 834 aa16.52■□□□□ 0.24
CUL3-207ENST00000451538 GABBR2O75899 941 aa16.51■□□□□ 0.23
CUL3-207ENST00000451538 VASPP50552 380 aaPredicted RBP16.49■□□□□ 0.23
CUL3-207ENST00000451538 FARP1Q9Y4F1 1045 aaPredicted RBP16.35■□□□□ 0.21
CUL3-207ENST00000451538 CD44P16070 742 aaKnown RBP16.31■□□□□ 0.2
CUL3-207ENST00000451538 IFNLR1Q8IU57 520 aaPredicted RBP16.28■□□□□ 0.2
CUL3-207ENST00000451538 LHX8Q68G74 356 aa16.26■□□□□ 0.19
CUL3-207ENST00000451538 DCAF8L2P0C7V8 631 aa16.23■□□□□ 0.19
CUL3-207ENST00000451538 CLCN6P51797 869 aa16.22■□□□□ 0.19
CUL3-207ENST00000451538 STAG3Q9UJ98 1225 aa16.18■□□□□ 0.18
CUL3-207ENST00000451538 POTEIP0CG38 1075 aa16.14■□□□□ 0.17
CUL3-207ENST00000451538 CREBZFQ9NS37 354 aa16.11■□□□□ 0.17
CUL3-207ENST00000451538 KLHL34Q8N239 644 aa16.1■□□□□ 0.17
CUL3-207ENST00000451538 PLCB2Q00722 1185 aa16.06■□□□□ 0.16
CUL3-207ENST00000451538 ZNF579Q8NAF0 562 aaKnown RBP16.06■□□□□ 0.16
CUL3-207ENST00000451538 ZRANB1Q9UGI0 708 aa16.05■□□□□ 0.16
CUL3-207ENST00000451538 PKD2Q13563 968 aa16.03■□□□□ 0.16
CUL3-207ENST00000451538 DCBLD2Q96PD2 775 aa16.02■□□□□ 0.16
CUL3-207ENST00000451538 SPOCK2Q92563 424 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms