RNA–Protein interactions for RNA: ENST00000462758.1

LPP-212, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 4

Gene LPP, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-212ENST00000462758 CHIC1Q5VXU3 224 aa19.62■□□□□ 0.73
LPP-212ENST00000462758 AEBP2Q6ZN18 517 aaPredicted RBP19.45■□□□□ 0.7
LPP-212ENST00000462758 PHF23Q9BUL5 403 aaPredicted RBP17.45■□□□□ 0.38
LPP-212ENST00000462758 PLPPR3Q6T4P5 718 aa16.24■□□□□ 0.19
LPP-212ENST00000462758 SENP3Q9H4L4 574 aaPredicted RBP16.2■□□□□ 0.18
LPP-212ENST00000462758 ADRA2BP18089 450 aa15.4■□□□□ 0.06
LPP-212ENST00000462758 PPP6R1Q9UPN7 881 aa15.19■□□□□ 0.02
LPP-212ENST00000462758 KCNA4P22459 653 aa15.1■□□□□ 0.01
LPP-212ENST00000462758 EHMT2Q96KQ7 1210 aa15.09■□□□□ 0.01
LPP-212ENST00000462758 FOXD1Q16676 465 aa15.08■□□□□ 0
LPP-212ENST00000462758 POTEDQ86YR6 584 aa14.93□□□□□ -0.02
LPP-212ENST00000462758 PPP4R3CPQ6ZMV5 832 aa14.49□□□□□ -0.09
LPP-212ENST00000462758 SLC4A1APQ9BWU0 796 aaKnown RBP14.46□□□□□ -0.09
LPP-212ENST00000462758 CSRNP3Q8WYN3 585 aa14.45□□□□□ -0.1
LPP-212ENST00000462758 PIAS4Q8N2W9 510 aaPredicted RBP14.4□□□□□ -0.1
LPP-212ENST00000462758 NCBP3Q53F19 620 aaKnown RBP14.21□□□□□ -0.13
LPP-212ENST00000462758 NPM3O75607 178 aaKnown RBP14.14□□□□□ -0.15
LPP-212ENST00000462758 ZBTB22O15209 634 aa13.94□□□□□ -0.18
LPP-212ENST00000462758 CNKSR2Q8WXI2 1034 aa13.83□□□□□ -0.2
LPP-212ENST00000462758 SCAF1Q9H7N4 1312 aaKnown RBP13.69□□□□□ -0.22
LPP-212ENST00000462758 MSH5O43196 834 aa13.66□□□□□ -0.22
LPP-212ENST00000462758 MAPK8IP2Q13387 824 aaPredicted RBP13.63□□□□□ -0.23
LPP-212ENST00000462758 FOXD4L1Q9NU39 408 aa13.56□□□□□ -0.24
LPP-212ENST00000462758 RNF216Q9NWF9 866 aaPredicted RBP13.35□□□□□ -0.27
LPP-212ENST00000462758 DNAJC5BQ9UF47 199 aa13.32□□□□□ -0.28
LPP-212ENST00000462758 RTN4Q9NQC3 1192 aaKnown RBP13.27□□□□□ -0.29
LPP-212ENST00000462758 SLC24A1O60721 1099 aa13.18□□□□□ -0.3
LPP-212ENST00000462758 SLC4A2P04920 1241 aa13.18□□□□□ -0.3
LPP-212ENST00000462758 AMER1Q5JTC6 1135 aaPredicted RBP13.1□□□□□ -0.31
LPP-212ENST00000462758 HOXD11P31277 338 aaPredicted RBP13.09□□□□□ -0.31
LPP-212ENST00000462758 DMRT2Q9Y5R5 561 aa13.08□□□□□ -0.32
LPP-212ENST00000462758 FKBP8Q14318 412 aa13.04□□□□□ -0.32
LPP-212ENST00000462758 MYCNP04198 464 aaPredicted RBP12.95□□□□□ -0.34
LPP-212ENST00000462758 ATXN8OSP0DMR3 200 aa12.89□□□□□ -0.35
LPP-212ENST00000462758 ATF5Q9Y2D1 282 aaPredicted RBP12.74□□□□□ -0.37
LPP-212ENST00000462758 DCAF8L1A6NGE4 600 aa12.66□□□□□ -0.38
LPP-212ENST00000462758 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.57□□□□□ -0.4
LPP-212ENST00000462758 U3KPZ7 1027 aaPredicted RBP12.46□□□□□ -0.41
LPP-212ENST00000462758 SAMD1Q6SPF0 538 aaPredicted RBP12.42□□□□□ -0.42
LPP-212ENST00000462758 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.38□□□□□ -0.43
LPP-212ENST00000462758 HNRNPUL2Q1KMD3 747 aaKnown RBP12.38□□□□□ -0.43
LPP-212ENST00000462758 ZNF219Q9P2Y4 722 aaPredicted RBP12.32□□□□□ -0.44
LPP-212ENST00000462758 CACNB1Q02641 598 aaPredicted RBP12.3□□□□□ -0.44
LPP-212ENST00000462758 SPDYE4A6NLX3 237 aa12.22□□□□□ -0.45
LPP-212ENST00000462758 MKRN4PQ13434 485 aaPredicted RBP12.17□□□□□ -0.46
LPP-212ENST00000462758 FBXO3Q9UK99 471 aa12.17□□□□□ -0.46
LPP-212ENST00000462758 PLCB2Q00722 1185 aa12.13□□□□□ -0.47
LPP-212ENST00000462758 DCAF8L2P0C7V8 631 aa12.12□□□□□ -0.47
LPP-212ENST00000462758 VASPP50552 380 aaPredicted RBP12.09□□□□□ -0.47
LPP-212ENST00000462758 HAP1P54257 671 aaPredicted RBP12.07□□□□□ -0.48
LPP-212ENST00000462758 IFNLR1Q8IU57 520 aaPredicted RBP12.05□□□□□ -0.48
LPP-212ENST00000462758 APLP2Q06481 763 aa12.04□□□□□ -0.48
LPP-212ENST00000462758 PROM2Q8N271 834 aa12.02□□□□□ -0.49
LPP-212ENST00000462758 TRHP20396 242 aaPredicted RBP12□□□□□ -0.49
LPP-212ENST00000462758 FBLN2P98095 1184 aa11.97□□□□□ -0.49
LPP-212ENST00000462758 SPINK5Q9NQ38 1064 aaPredicted RBP11.97□□□□□ -0.49
LPP-212ENST00000462758 POLA2Q14181 598 aa11.94□□□□□ -0.5
LPP-212ENST00000462758 PKD2Q13563 968 aa11.93□□□□□ -0.5
LPP-212ENST00000462758 PRKCSHP14314 528 aaPredicted RBP11.89□□□□□ -0.51
LPP-212ENST00000462758 CAPN15O75808 1086 aa11.84□□□□□ -0.51
LPP-212ENST00000462758 BCANQ96GW7 911 aa11.79□□□□□ -0.52
LPP-212ENST00000462758 KLHL34Q8N239 644 aa11.77□□□□□ -0.53
LPP-212ENST00000462758 ABCB7O75027 752 aa11.76□□□□□ -0.53
LPP-212ENST00000462758 VSIG10Q8N0Z9 540 aa11.74□□□□□ -0.53
LPP-212ENST00000462758 NPM1P06748 294 aaKnown RBP eCLIP11.73□□□□□ -0.53
LPP-212ENST00000462758 ECM2O94769 699 aaPredicted RBP11.72□□□□□ -0.53
LPP-212ENST00000462758 TAOK2Q9UL54 1235 aa11.71□□□□□ -0.53
LPP-212ENST00000462758 PAXIP1Q6ZW49 1069 aaPredicted RBP11.7□□□□□ -0.54
LPP-212ENST00000462758 SPOCK2Q92563 424 aa11.7□□□□□ -0.54
LPP-212ENST00000462758 CFAP44Q96MT7 982 aa11.7□□□□□ -0.54
LPP-212ENST00000462758 KDM2AQ9Y2K7 1162 aa11.7□□□□□ -0.54
LPP-212ENST00000462758 RNF39Q9H2S5 420 aa11.67□□□□□ -0.54
LPP-212ENST00000462758 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.66□□□□□ -0.54
LPP-212ENST00000462758 BBXQ8WY36 941 aaPredicted RBP11.65□□□□□ -0.54
LPP-212ENST00000462758 RGL2O15211 777 aa11.62□□□□□ -0.55
LPP-212ENST00000462758 TPRNQ4KMQ1 711 aa11.6□□□□□ -0.55
LPP-212ENST00000462758 ZNF692Q9BU19 519 aaPredicted RBP11.6□□□□□ -0.55
LPP-212ENST00000462758 PLCD3Q8N3E9 789 aa11.59□□□□□ -0.55
LPP-212ENST00000462758 ZBTB12Q9Y330 459 aaPredicted RBP11.59□□□□□ -0.55
LPP-212ENST00000462758 TSHZ2Q9NRE2 1034 aa11.54□□□□□ -0.56
LPP-212ENST00000462758 OSCARQ8IYS5 282 aa11.53□□□□□ -0.56
LPP-212ENST00000462758 MIER1Q8N108 512 aa11.53□□□□□ -0.56
LPP-212ENST00000462758 STAG3Q9UJ98 1225 aa11.51□□□□□ -0.57
LPP-212ENST00000462758 C1QBPQ07021 282 aaKnown RBP11.49□□□□□ -0.57
LPP-212ENST00000462758 POTEHQ6S545 545 aa11.49□□□□□ -0.57
LPP-212ENST00000462758 PABPN1Q86U42 306 aaKnown RBP eCLIP11.49□□□□□ -0.57
LPP-212ENST00000462758 SPRYD3Q8NCJ5 442 aa11.49□□□□□ -0.57
LPP-212ENST00000462758 CIZ1Q9ULV3 898 aaPredicted RBP11.49□□□□□ -0.57
LPP-212ENST00000462758 CHGAP10645 457 aaKnown RBP11.47□□□□□ -0.57
LPP-212ENST00000462758 SSUH2Q9Y2M2 353 aa11.44□□□□□ -0.58
LPP-212ENST00000462758 SPDYE2BA6NHP3 402 aa11.41□□□□□ -0.58
LPP-212ENST00000462758 SPDYE6P0CI01 402 aa11.41□□□□□ -0.58
LPP-212ENST00000462758 DSG3P32926 999 aa11.41□□□□□ -0.58
LPP-212ENST00000462758 SPDYE2Q495Y8 402 aa11.41□□□□□ -0.58
LPP-212ENST00000462758 PLEKHG5O94827 1062 aa11.28□□□□□ -0.6
LPP-212ENST00000462758 NBR1Q14596 966 aa11.25□□□□□ -0.61
LPP-212ENST00000462758 RNF25Q96BH1 459 aaPredicted RBP11.25□□□□□ -0.61
LPP-212ENST00000462758 ZBTB47Q9UFB7 747 aaPredicted RBP11.24□□□□□ -0.61
LPP-212ENST00000462758 HS6ST3Q8IZP7 471 aa11.23□□□□□ -0.61
LPP-212ENST00000462758 DNAJC5Q9H3Z4 198 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms