Protein–RNA interactions for Protein: P35713

SOX18, Transcription factor SOX-18, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18P35713 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SOX18P35713 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
SOX18P35713 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
SOX18P35713 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
SOX18P35713 SLC6A10P-202ENST00000431994 2058 ntBASIC22.24■■□□□ 1.15
SOX18P35713 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SOX18P35713 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.24■■□□□ 1.15
SOX18P35713 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.23■■□□□ 1.15
SOX18P35713 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SOX18P35713 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SOX18P35713 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SOX18P35713 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.22■■□□□ 1.15
SOX18P35713 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SOX18P35713 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SOX18P35713 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SOX18P35713 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.22■■□□□ 1.15
SOX18P35713 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SOX18P35713 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SOX18P35713 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SOX18P35713 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.22■■□□□ 1.15
SOX18P35713 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
SOX18P35713 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
SOX18P35713 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SOX18P35713 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SOX18P35713 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SOX18P35713 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.21■■□□□ 1.15
SOX18P35713 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.21■■□□□ 1.15
SOX18P35713 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SOX18P35713 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.21■■□□□ 1.15
SOX18P35713 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SOX18P35713 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SOX18P35713 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SOX18P35713 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SOX18P35713 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
SOX18P35713 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SOX18P35713 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
SOX18P35713 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
SOX18P35713 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.2■■□□□ 1.14
SOX18P35713 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SOX18P35713 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
SOX18P35713 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SOX18P35713 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SOX18P35713 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SOX18P35713 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SOX18P35713 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.2■■□□□ 1.14
SOX18P35713 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SOX18P35713 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
SOX18P35713 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.19■■□□□ 1.14
SOX18P35713 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SOX18P35713 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
SOX18P35713 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SOX18P35713 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SOX18P35713 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SOX18P35713 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.19■■□□□ 1.14
SOX18P35713 MIR6765-201ENST00000614092 87 ntBASIC22.19■■□□□ 1.14
SOX18P35713 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
SOX18P35713 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.19■■□□□ 1.14
SOX18P35713 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
SOX18P35713 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SOX18P35713 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SOX18P35713 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
SOX18P35713 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SOX18P35713 AC004987.1-201ENST00000428627 508 ntBASIC22.18■■□□□ 1.14
SOX18P35713 RPS2P7-201ENST00000447334 885 ntBASIC22.18■■□□□ 1.14
SOX18P35713 AC018755.3-202ENST00000596210 929 ntBASIC22.18■■□□□ 1.14
SOX18P35713 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SOX18P35713 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SOX18P35713 AC022211.4-201ENST00000625094 2161 ntBASIC22.18■■□□□ 1.14
SOX18P35713 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SOX18P35713 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SOX18P35713 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
SOX18P35713 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
SOX18P35713 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SOX18P35713 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SOX18P35713 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SOX18P35713 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SOX18P35713 AC087393.1-201ENST00000582896 145 ntBASIC22.16■■□□□ 1.14
SOX18P35713 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SOX18P35713 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SOX18P35713 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SOX18P35713 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SOX18P35713 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.15■■□□□ 1.14
SOX18P35713 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.15■■□□□ 1.14
SOX18P35713 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SOX18P35713 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SOX18P35713 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
SOX18P35713 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SOX18P35713 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SOX18P35713 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.14■■□□□ 1.13
SOX18P35713 ATP5G2P3-201ENST00000429083 425 ntBASIC22.14■■□□□ 1.13
SOX18P35713 DUX4L18-201ENST00000553347 1267 ntBASIC22.14■■□□□ 1.13
SOX18P35713 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
SOX18P35713 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SOX18P35713 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
SOX18P35713 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
SOX18P35713 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SOX18P35713 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.14■■□□□ 1.13
SOX18P35713 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SOX18P35713 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SOX18P35713 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms