Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RAB3BP20337 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB3BP20337 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RAB3BP20337 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB3BP20337 DUSP8P5-201ENST00000422884 1815 ntBASIC20.71■□□□□ 0.91
RAB3BP20337 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB3BP20337 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB3BP20337 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB3BP20337 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB3BP20337 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB3BP20337 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB3BP20337 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB3BP20337 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB3BP20337 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB3BP20337 AC044849.2-201ENST00000606596 710 ntBASIC20.69■□□□□ 0.9
RAB3BP20337 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.69■□□□□ 0.9
RAB3BP20337 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB3BP20337 AC079834.2-201ENST00000609776 1949 ntBASIC20.68■□□□□ 0.9
RAB3BP20337 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3BP20337 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RAB3BP20337 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3BP20337 AC021231.2-201ENST00000594613 730 ntBASIC20.68■□□□□ 0.9
RAB3BP20337 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3BP20337 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.68■□□□□ 0.9
RAB3BP20337 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.68■□□□□ 0.9
RAB3BP20337 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB3BP20337 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB3BP20337 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB3BP20337 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB3BP20337 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RAB3BP20337 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.67■□□□□ 0.9
RAB3BP20337 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
RAB3BP20337 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB3BP20337 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3BP20337 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3BP20337 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3BP20337 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.66■□□□□ 0.9
RAB3BP20337 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.66■□□□□ 0.9
RAB3BP20337 MIR219A2-201ENST00000608502 1504 ntBASIC20.66■□□□□ 0.9
RAB3BP20337 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RAB3BP20337 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.66■□□□□ 0.9
RAB3BP20337 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RAB3BP20337 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
RAB3BP20337 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.65■□□□□ 0.9
RAB3BP20337 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.65■□□□□ 0.9
RAB3BP20337 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3BP20337 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3BP20337 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3BP20337 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RAB3BP20337 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3BP20337 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB3BP20337 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB3BP20337 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB3BP20337 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
RAB3BP20337 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RAB3BP20337 AL359258.2-201ENST00000564063 1566 ntBASIC20.64■□□□□ 0.9
RAB3BP20337 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAB3BP20337 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RAB3BP20337 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB3BP20337 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RAB3BP20337 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3BP20337 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3BP20337 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.63■□□□□ 0.89
RAB3BP20337 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3BP20337 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3BP20337 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3BP20337 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3BP20337 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3BP20337 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.62■□□□□ 0.89
RAB3BP20337 DUX4L29-201ENST00000425409 679 ntBASIC20.62■□□□□ 0.89
RAB3BP20337 AC008813.1-201ENST00000536597 885 ntBASIC20.62■□□□□ 0.89
RAB3BP20337 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.62■□□□□ 0.89
RAB3BP20337 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3BP20337 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3BP20337 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.62■□□□□ 0.89
RAB3BP20337 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.62■□□□□ 0.89
RAB3BP20337 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3BP20337 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB3BP20337 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB3BP20337 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RAB3BP20337 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB3BP20337 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RAB3BP20337 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB3BP20337 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.61■□□□□ 0.89
RAB3BP20337 AC148477.6-201ENST00000623746 465 ntBASIC20.61■□□□□ 0.89
RAB3BP20337 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RAB3BP20337 AC004812.2-201ENST00000611079 2094 ntBASIC20.61■□□□□ 0.89
RAB3BP20337 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RAB3BP20337 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB3BP20337 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB3BP20337 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RAB3BP20337 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB3BP20337 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.6■□□□□ 0.89
RAB3BP20337 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB3BP20337 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RAB3BP20337 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.6■□□□□ 0.89
RAB3BP20337 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB3BP20337 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB3BP20337 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB3BP20337 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms