Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
UBCP0CG48 SLC6A10P-202ENST00000431994 2058 ntBASIC20.73■□□□□ 0.91
UBCP0CG48 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBCP0CG48 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBCP0CG48 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UBCP0CG48 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.73■□□□□ 0.91
UBCP0CG48 MIR3960-201ENST00000583311 91 ntBASIC20.73■□□□□ 0.91
UBCP0CG48 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UBCP0CG48 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBCP0CG48 AC025884.2-201ENST00000553429 711 ntBASIC20.72■□□□□ 0.91
UBCP0CG48 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UBCP0CG48 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UBCP0CG48 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBCP0CG48 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.71■□□□□ 0.91
UBCP0CG48 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UBCP0CG48 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBCP0CG48 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBCP0CG48 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.71■□□□□ 0.91
UBCP0CG48 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBCP0CG48 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBCP0CG48 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBCP0CG48 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBCP0CG48 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
UBCP0CG48 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
UBCP0CG48 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBCP0CG48 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.7■□□□□ 0.9
UBCP0CG48 AC060814.1-201ENST00000554326 538 ntBASIC20.7■□□□□ 0.9
UBCP0CG48 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.7■□□□□ 0.9
UBCP0CG48 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBCP0CG48 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBCP0CG48 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBCP0CG48 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.69■□□□□ 0.9
UBCP0CG48 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBCP0CG48 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBCP0CG48 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBCP0CG48 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBCP0CG48 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.68■□□□□ 0.9
UBCP0CG48 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBCP0CG48 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBCP0CG48 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBCP0CG48 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBCP0CG48 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBCP0CG48 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.68■□□□□ 0.9
UBCP0CG48 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBCP0CG48 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBCP0CG48 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBCP0CG48 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBCP0CG48 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBCP0CG48 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBCP0CG48 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBCP0CG48 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBCP0CG48 LINC01124-201ENST00000409786 2117 ntBASIC20.68■□□□□ 0.9
UBCP0CG48 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
UBCP0CG48 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBCP0CG48 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBCP0CG48 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBCP0CG48 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
UBCP0CG48 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBCP0CG48 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBCP0CG48 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.66■□□□□ 0.9
UBCP0CG48 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBCP0CG48 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBCP0CG48 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBCP0CG48 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBCP0CG48 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.65■□□□□ 0.9
UBCP0CG48 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
UBCP0CG48 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBCP0CG48 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBCP0CG48 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBCP0CG48 SMPD5-203ENST00000639008 1464 ntBASIC20.65■□□□□ 0.9
UBCP0CG48 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBCP0CG48 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBCP0CG48 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
UBCP0CG48 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
UBCP0CG48 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
UBCP0CG48 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.64■□□□□ 0.89
UBCP0CG48 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.64■□□□□ 0.89
UBCP0CG48 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBCP0CG48 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
UBCP0CG48 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
UBCP0CG48 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBCP0CG48 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
UBCP0CG48 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UBCP0CG48 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBCP0CG48 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBCP0CG48 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.63■□□□□ 0.89
UBCP0CG48 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
UBCP0CG48 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBCP0CG48 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBCP0CG48 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
UBCP0CG48 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.63■□□□□ 0.89
UBCP0CG48 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBCP0CG48 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBCP0CG48 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBCP0CG48 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
UBCP0CG48 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.62■□□□□ 0.89
UBCP0CG48 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBCP0CG48 AC092296.2-201ENST00000589470 999 ntBASIC20.62■□□□□ 0.89
UBCP0CG48 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
UBCP0CG48 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms