Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MT-ND1P03886 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MT-ND1P03886 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MT-ND1P03886 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MT-ND1P03886 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.29■■□□□ 1.16
MT-ND1P03886 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MT-ND1P03886 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
MT-ND1P03886 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MT-ND1P03886 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MT-ND1P03886 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
MT-ND1P03886 AL359504.2-201ENST00000605506 1601 ntBASIC22.28■■□□□ 1.16
MT-ND1P03886 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MT-ND1P03886 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MT-ND1P03886 SLC6A10P-202ENST00000431994 2058 ntBASIC22.28■■□□□ 1.16
MT-ND1P03886 AP003733.4-201ENST00000623785 1697 ntBASIC22.28■■□□□ 1.16
MT-ND1P03886 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MT-ND1P03886 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MT-ND1P03886 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.28■■□□□ 1.16
MT-ND1P03886 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
MT-ND1P03886 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MT-ND1P03886 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
MT-ND1P03886 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MT-ND1P03886 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
MT-ND1P03886 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
MT-ND1P03886 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.27■■□□□ 1.16
MT-ND1P03886 AC097639.1-201ENST00000565519 1891 ntBASIC22.27■■□□□ 1.16
MT-ND1P03886 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.27■■□□□ 1.16
MT-ND1P03886 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.27■■□□□ 1.16
MT-ND1P03886 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.27■■□□□ 1.16
MT-ND1P03886 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
MT-ND1P03886 AC068473.5-201ENST00000616428 2072 ntBASIC22.27■■□□□ 1.16
MT-ND1P03886 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MT-ND1P03886 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.26■■□□□ 1.15
MT-ND1P03886 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
MT-ND1P03886 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MT-ND1P03886 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.25■■□□□ 1.15
MT-ND1P03886 HLA-V-202ENST00000446817 847 ntBASIC22.25■■□□□ 1.15
MT-ND1P03886 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.25■■□□□ 1.15
MT-ND1P03886 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MT-ND1P03886 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MT-ND1P03886 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MT-ND1P03886 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
MT-ND1P03886 ABHD17AP4-201ENST00000411545 909 ntBASIC22.24■■□□□ 1.15
MT-ND1P03886 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
MT-ND1P03886 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MT-ND1P03886 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
MT-ND1P03886 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MT-ND1P03886 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MT-ND1P03886 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MT-ND1P03886 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.23■■□□□ 1.15
MT-ND1P03886 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
MT-ND1P03886 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
MT-ND1P03886 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
MT-ND1P03886 AL359258.2-201ENST00000564063 1566 ntBASIC22.22■■□□□ 1.15
MT-ND1P03886 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
MT-ND1P03886 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
MT-ND1P03886 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.22■■□□□ 1.15
MT-ND1P03886 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
MT-ND1P03886 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
MT-ND1P03886 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
MT-ND1P03886 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.21■■□□□ 1.15
MT-ND1P03886 CR559946.2-201ENST00000623684 991 ntBASIC22.21■■□□□ 1.15
MT-ND1P03886 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.21■■□□□ 1.15
MT-ND1P03886 LINC00543-201ENST00000567234 1845 ntBASIC22.21■■□□□ 1.15
MT-ND1P03886 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.21■■□□□ 1.15
MT-ND1P03886 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
MT-ND1P03886 AC012676.1-201ENST00000574705 1949 ntBASIC22.21■■□□□ 1.15
MT-ND1P03886 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
MT-ND1P03886 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
MT-ND1P03886 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
MT-ND1P03886 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
MT-ND1P03886 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.2■■□□□ 1.15
MT-ND1P03886 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
MT-ND1P03886 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
MT-ND1P03886 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
MT-ND1P03886 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC22.2■■□□□ 1.14
MT-ND1P03886 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
MT-ND1P03886 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
MT-ND1P03886 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
MT-ND1P03886 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.2■■□□□ 1.14
MT-ND1P03886 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
MT-ND1P03886 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
MT-ND1P03886 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
MT-ND1P03886 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
MT-ND1P03886 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
MT-ND1P03886 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
MT-ND1P03886 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
MT-ND1P03886 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
MT-ND1P03886 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.19■■□□□ 1.14
MT-ND1P03886 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.19■■□□□ 1.14
MT-ND1P03886 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
MT-ND1P03886 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.18■■□□□ 1.14
MT-ND1P03886 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
MT-ND1P03886 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
MT-ND1P03886 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.18■■□□□ 1.14
MT-ND1P03886 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
MT-ND1P03886 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
MT-ND1P03886 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MT-ND1P03886 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
MT-ND1P03886 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms