Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDRT1O95170 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.04■□□□□ 0.96
CDRT1O95170 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.04■□□□□ 0.96
CDRT1O95170 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDRT1O95170 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
CDRT1O95170 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.03■□□□□ 0.96
CDRT1O95170 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDRT1O95170 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.03■□□□□ 0.96
CDRT1O95170 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.03■□□□□ 0.96
CDRT1O95170 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDRT1O95170 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDRT1O95170 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDRT1O95170 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CDRT1O95170 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDRT1O95170 CLDN5-201ENST00000403084 2357 ntBASIC21.02■□□□□ 0.96
CDRT1O95170 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDRT1O95170 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDRT1O95170 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.02■□□□□ 0.96
CDRT1O95170 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.02■□□□□ 0.96
CDRT1O95170 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.02■□□□□ 0.96
CDRT1O95170 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDRT1O95170 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDRT1O95170 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDRT1O95170 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CDRT1O95170 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
CDRT1O95170 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
CDRT1O95170 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CDRT1O95170 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CDRT1O95170 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CDRT1O95170 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDRT1O95170 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDRT1O95170 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDRT1O95170 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDRT1O95170 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDRT1O95170 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21■□□□□ 0.95
CDRT1O95170 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDRT1O95170 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDRT1O95170 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDRT1O95170 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CDRT1O95170 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.99■□□□□ 0.95
CDRT1O95170 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CDRT1O95170 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDRT1O95170 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDRT1O95170 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.99■□□□□ 0.95
CDRT1O95170 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDRT1O95170 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDRT1O95170 AC141586.4-201ENST00000624558 1573 ntBASIC20.98■□□□□ 0.95
CDRT1O95170 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDRT1O95170 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDRT1O95170 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDRT1O95170 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDRT1O95170 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDRT1O95170 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDRT1O95170 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDRT1O95170 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDRT1O95170 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDRT1O95170 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDRT1O95170 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDRT1O95170 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDRT1O95170 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDRT1O95170 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDRT1O95170 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDRT1O95170 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.96■□□□□ 0.95
CDRT1O95170 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDRT1O95170 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDRT1O95170 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CDRT1O95170 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.96■□□□□ 0.95
CDRT1O95170 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CDRT1O95170 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CDRT1O95170 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
CDRT1O95170 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDRT1O95170 SLC6A10P-202ENST00000431994 2058 ntBASIC20.95■□□□□ 0.94
CDRT1O95170 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CDRT1O95170 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.95■□□□□ 0.94
CDRT1O95170 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDRT1O95170 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.95■□□□□ 0.94
CDRT1O95170 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDRT1O95170 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDRT1O95170 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CDRT1O95170 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDRT1O95170 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDRT1O95170 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDRT1O95170 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CDRT1O95170 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDRT1O95170 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDRT1O95170 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDRT1O95170 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDRT1O95170 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CDRT1O95170 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.93■□□□□ 0.94
CDRT1O95170 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDRT1O95170 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDRT1O95170 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.93■□□□□ 0.94
CDRT1O95170 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.93■□□□□ 0.94
CDRT1O95170 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.93■□□□□ 0.94
CDRT1O95170 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CDRT1O95170 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDRT1O95170 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDRT1O95170 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDRT1O95170 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.93■□□□□ 0.94
CDRT1O95170 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms