Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHOXO15266 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.06■□□□□ 0.8
SHOXO15266 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SHOXO15266 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHOXO15266 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SHOXO15266 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SHOXO15266 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SHOXO15266 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHOXO15266 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
SHOXO15266 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.05■□□□□ 0.8
SHOXO15266 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHOXO15266 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHOXO15266 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SHOXO15266 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.04■□□□□ 0.8
SHOXO15266 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.04■□□□□ 0.8
SHOXO15266 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHOXO15266 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SHOXO15266 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHOXO15266 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHOXO15266 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SHOXO15266 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.03■□□□□ 0.8
SHOXO15266 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHOXO15266 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.03■□□□□ 0.8
SHOXO15266 DUX4L13-201ENST00000554103 1267 ntBASIC20.03■□□□□ 0.8
SHOXO15266 DUX4L15-201ENST00000611059 1267 ntBASIC20.03■□□□□ 0.8
SHOXO15266 DUX4L23-201ENST00000615195 1269 ntBASIC20.03■□□□□ 0.8
SHOXO15266 DUX4L24-201ENST00000617576 1269 ntBASIC20.03■□□□□ 0.8
SHOXO15266 DUX4L22-201ENST00000618238 1269 ntBASIC20.03■□□□□ 0.8
SHOXO15266 DUX4L20-201ENST00000619712 1269 ntBASIC20.03■□□□□ 0.8
SHOXO15266 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.03■□□□□ 0.8
SHOXO15266 DUX4L21-201ENST00000622058 1269 ntBASIC20.03■□□□□ 0.8
SHOXO15266 DUX4L10-201ENST00000622460 1267 ntBASIC20.03■□□□□ 0.8
SHOXO15266 DUX4L25-201ENST00000624915 1269 ntBASIC20.03■□□□□ 0.8
SHOXO15266 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
SHOXO15266 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHOXO15266 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHOXO15266 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHOXO15266 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHOXO15266 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHOXO15266 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.02■□□□□ 0.8
SHOXO15266 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHOXO15266 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SHOXO15266 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHOXO15266 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHOXO15266 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHOXO15266 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.01■□□□□ 0.79
SHOXO15266 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHOXO15266 DUX4L11-201ENST00000611504 1267 ntBASIC20.01■□□□□ 0.79
SHOXO15266 DUX4L12-201ENST00000614593 1267 ntBASIC20.01■□□□□ 0.79
SHOXO15266 DUX4L14-201ENST00000621227 1267 ntBASIC20.01■□□□□ 0.79
SHOXO15266 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.01■□□□□ 0.79
SHOXO15266 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHOXO15266 C1orf229-201ENST00000623686 2258 ntBASIC20.01■□□□□ 0.79
SHOXO15266 AP004609.3-201ENST00000610705 1884 ntBASIC20.01■□□□□ 0.79
SHOXO15266 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SHOXO15266 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20■□□□□ 0.79
SHOXO15266 WHAMMP3-201ENST00000611636 1609 ntBASIC20■□□□□ 0.79
SHOXO15266 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHOXO15266 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHOXO15266 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHOXO15266 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SHOXO15266 ZNRF2P2-203ENST00000454624 420 ntBASIC19.99■□□□□ 0.79
SHOXO15266 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SHOXO15266 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHOXO15266 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SHOXO15266 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHOXO15266 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHOXO15266 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SHOXO15266 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SHOXO15266 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHOXO15266 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SHOXO15266 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHOXO15266 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHOXO15266 LINC00565-201ENST00000562710 2331 ntBASIC19.97■□□□□ 0.79
SHOXO15266 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHOXO15266 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHOXO15266 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.97■□□□□ 0.79
SHOXO15266 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHOXO15266 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SHOXO15266 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SHOXO15266 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHOXO15266 AL117328.2-201ENST00000624617 1940 ntBASIC19.96■□□□□ 0.79
SHOXO15266 AC008813.1-201ENST00000536597 885 ntBASIC19.96■□□□□ 0.79
SHOXO15266 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHOXO15266 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHOXO15266 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SHOXO15266 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHOXO15266 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHOXO15266 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHOXO15266 DUSP8P5-201ENST00000422884 1815 ntBASIC19.95■□□□□ 0.78
SHOXO15266 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.95■□□□□ 0.78
SHOXO15266 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.95■□□□□ 0.78
SHOXO15266 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHOXO15266 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHOXO15266 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SHOXO15266 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHOXO15266 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHOXO15266 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHOXO15266 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHOXO15266 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms