Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TNFRSF11BO00300 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.89■■□□□ 1.09
TNFRSF11BO00300 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TNFRSF11BO00300 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
TNFRSF11BO00300 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TNFRSF11BO00300 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
TNFRSF11BO00300 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TNFRSF11BO00300 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TNFRSF11BO00300 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TNFRSF11BO00300 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TNFRSF11BO00300 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.87■■□□□ 1.09
TNFRSF11BO00300 AC126177.7-201ENST00000547904 679 ntBASIC21.87■■□□□ 1.09
TNFRSF11BO00300 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TNFRSF11BO00300 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TNFRSF11BO00300 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.86■■□□□ 1.09
TNFRSF11BO00300 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.86■■□□□ 1.09
TNFRSF11BO00300 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TNFRSF11BO00300 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TNFRSF11BO00300 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.86■■□□□ 1.09
TNFRSF11BO00300 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TNFRSF11BO00300 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TNFRSF11BO00300 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TNFRSF11BO00300 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TNFRSF11BO00300 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.85■■□□□ 1.09
TNFRSF11BO00300 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
TNFRSF11BO00300 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.85■■□□□ 1.09
TNFRSF11BO00300 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TNFRSF11BO00300 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TNFRSF11BO00300 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TNFRSF11BO00300 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.85■■□□□ 1.09
TNFRSF11BO00300 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TNFRSF11BO00300 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
TNFRSF11BO00300 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.85■■□□□ 1.09
TNFRSF11BO00300 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
TNFRSF11BO00300 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TNFRSF11BO00300 AC141586.4-201ENST00000624558 1573 ntBASIC21.84■■□□□ 1.09
TNFRSF11BO00300 AC133561.1-201ENST00000568600 2415 ntBASIC21.84■■□□□ 1.09
TNFRSF11BO00300 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TNFRSF11BO00300 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TNFRSF11BO00300 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.84■■□□□ 1.09
TNFRSF11BO00300 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.84■■□□□ 1.09
TNFRSF11BO00300 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
TNFRSF11BO00300 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TNFRSF11BO00300 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TNFRSF11BO00300 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TNFRSF11BO00300 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.84■■□□□ 1.09
TNFRSF11BO00300 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TNFRSF11BO00300 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TNFRSF11BO00300 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
TNFRSF11BO00300 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
TNFRSF11BO00300 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TNFRSF11BO00300 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.83■■□□□ 1.09
TNFRSF11BO00300 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.83■■□□□ 1.09
TNFRSF11BO00300 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TNFRSF11BO00300 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TNFRSF11BO00300 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TNFRSF11BO00300 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TNFRSF11BO00300 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF11BO00300 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF11BO00300 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF11BO00300 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF11BO00300 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF11BO00300 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF11BO00300 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.82■■□□□ 1.08
TNFRSF11BO00300 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF11BO00300 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNFRSF11BO00300 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
TNFRSF11BO00300 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TNFRSF11BO00300 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNFRSF11BO00300 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
TNFRSF11BO00300 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
TNFRSF11BO00300 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TNFRSF11BO00300 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.81■■□□□ 1.08
TNFRSF11BO00300 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.81■■□□□ 1.08
TNFRSF11BO00300 RPS2P35-201ENST00000443417 897 ntBASIC21.81■■□□□ 1.08
TNFRSF11BO00300 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.81■■□□□ 1.08
TNFRSF11BO00300 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNFRSF11BO00300 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.81■■□□□ 1.08
TNFRSF11BO00300 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
TNFRSF11BO00300 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TNFRSF11BO00300 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.8■■□□□ 1.08
TNFRSF11BO00300 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNFRSF11BO00300 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
TNFRSF11BO00300 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNFRSF11BO00300 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNFRSF11BO00300 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNFRSF11BO00300 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNFRSF11BO00300 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.79■■□□□ 1.08
TNFRSF11BO00300 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TNFRSF11BO00300 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFRSF11BO00300 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TNFRSF11BO00300 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFRSF11BO00300 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.79■■□□□ 1.08
TNFRSF11BO00300 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
TNFRSF11BO00300 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNFRSF11BO00300 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
TNFRSF11BO00300 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TNFRSF11BO00300 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TNFRSF11BO00300 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.78■■□□□ 1.08
TNFRSF11BO00300 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms