Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 AC074183.2-201ENST00000623112 922 ntBASIC18.8■□□□□ 0.6
LINC01548A6NM66 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC01548A6NM66 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC01548A6NM66 AC097639.1-201ENST00000565519 1891 ntBASIC18.8■□□□□ 0.6
LINC01548A6NM66 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.79■□□□□ 0.6
LINC01548A6NM66 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.79■□□□□ 0.6
LINC01548A6NM66 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LINC01548A6NM66 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.79■□□□□ 0.6
LINC01548A6NM66 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC01548A6NM66 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC01548A6NM66 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC01548A6NM66 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC01548A6NM66 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LINC01548A6NM66 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
LINC01548A6NM66 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.78■□□□□ 0.6
LINC01548A6NM66 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.78■□□□□ 0.6
LINC01548A6NM66 RARRES2P1-201ENST00000474487 481 ntBASIC18.78■□□□□ 0.6
LINC01548A6NM66 AC103834.1-201ENST00000520383 144 ntBASIC18.78■□□□□ 0.6
LINC01548A6NM66 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.78■□□□□ 0.6
LINC01548A6NM66 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC01548A6NM66 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
LINC01548A6NM66 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
LINC01548A6NM66 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC01548A6NM66 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC01548A6NM66 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC01548A6NM66 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LINC01548A6NM66 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC01548A6NM66 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.77■□□□□ 0.6
LINC01548A6NM66 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LINC01548A6NM66 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LINC01548A6NM66 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LINC01548A6NM66 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01548A6NM66 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01548A6NM66 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01548A6NM66 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.76■□□□□ 0.59
LINC01548A6NM66 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.76■□□□□ 0.59
LINC01548A6NM66 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01548A6NM66 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01548A6NM66 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01548A6NM66 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC01548A6NM66 AC135731.1-201ENST00000569415 2548 ntBASIC18.75■□□□□ 0.59
LINC01548A6NM66 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
LINC01548A6NM66 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LINC01548A6NM66 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC01548A6NM66 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LINC01548A6NM66 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.75■□□□□ 0.59
LINC01548A6NM66 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.75■□□□□ 0.59
LINC01548A6NM66 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
LINC01548A6NM66 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC01548A6NM66 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.75■□□□□ 0.59
LINC01548A6NM66 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
LINC01548A6NM66 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.74■□□□□ 0.59
LINC01548A6NM66 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC01548A6NM66 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.74■□□□□ 0.59
LINC01548A6NM66 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
LINC01548A6NM66 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.74■□□□□ 0.59
LINC01548A6NM66 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.74■□□□□ 0.59
LINC01548A6NM66 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LINC01548A6NM66 AC019171.1-201ENST00000601251 1056 ntBASIC18.74■□□□□ 0.59
LINC01548A6NM66 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
LINC01548A6NM66 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC01548A6NM66 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01548A6NM66 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.73■□□□□ 0.59
LINC01548A6NM66 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01548A6NM66 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01548A6NM66 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01548A6NM66 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01548A6NM66 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.73■□□□□ 0.59
LINC01548A6NM66 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01548A6NM66 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01548A6NM66 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC01548A6NM66 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01548A6NM66 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.72■□□□□ 0.59
LINC01548A6NM66 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01548A6NM66 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LINC01548A6NM66 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01548A6NM66 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01548A6NM66 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.72■□□□□ 0.59
LINC01548A6NM66 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01548A6NM66 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01548A6NM66 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC01548A6NM66 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC01548A6NM66 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LINC01548A6NM66 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.71■□□□□ 0.59
LINC01548A6NM66 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC01548A6NM66 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC01548A6NM66 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC01548A6NM66 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC01548A6NM66 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LINC01548A6NM66 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01548A6NM66 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01548A6NM66 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.7■□□□□ 0.58
LINC01548A6NM66 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01548A6NM66 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01548A6NM66 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
LINC01548A6NM66 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01548A6NM66 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.69■□□□□ 0.58
LINC01548A6NM66 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LINC01548A6NM66 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01548A6NM66 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms