Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PCP4L1A6NKN8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCP4L1A6NKN8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.84■□□□□ 0.61
PCP4L1A6NKN8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PCP4L1A6NKN8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PCP4L1A6NKN8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCP4L1A6NKN8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCP4L1A6NKN8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCP4L1A6NKN8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCP4L1A6NKN8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.83■□□□□ 0.6
PCP4L1A6NKN8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCP4L1A6NKN8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PCP4L1A6NKN8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCP4L1A6NKN8 AL117328.2-201ENST00000624617 1940 ntBASIC18.82■□□□□ 0.6
PCP4L1A6NKN8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCP4L1A6NKN8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCP4L1A6NKN8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.82■□□□□ 0.6
PCP4L1A6NKN8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.82■□□□□ 0.6
PCP4L1A6NKN8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCP4L1A6NKN8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PCP4L1A6NKN8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.81■□□□□ 0.6
PCP4L1A6NKN8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCP4L1A6NKN8 AC007375.3-201ENST00000600936 2314 ntBASIC18.81■□□□□ 0.6
PCP4L1A6NKN8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCP4L1A6NKN8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCP4L1A6NKN8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PCP4L1A6NKN8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCP4L1A6NKN8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCP4L1A6NKN8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCP4L1A6NKN8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PCP4L1A6NKN8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
PCP4L1A6NKN8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCP4L1A6NKN8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCP4L1A6NKN8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCP4L1A6NKN8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.8■□□□□ 0.6
PCP4L1A6NKN8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.8■□□□□ 0.6
PCP4L1A6NKN8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PCP4L1A6NKN8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCP4L1A6NKN8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PCP4L1A6NKN8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCP4L1A6NKN8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCP4L1A6NKN8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCP4L1A6NKN8 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC18.78■□□□□ 0.6
PCP4L1A6NKN8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCP4L1A6NKN8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCP4L1A6NKN8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.78■□□□□ 0.6
PCP4L1A6NKN8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.78■□□□□ 0.6
PCP4L1A6NKN8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCP4L1A6NKN8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCP4L1A6NKN8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCP4L1A6NKN8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCP4L1A6NKN8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCP4L1A6NKN8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PCP4L1A6NKN8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PCP4L1A6NKN8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCP4L1A6NKN8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.77■□□□□ 0.6
PCP4L1A6NKN8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCP4L1A6NKN8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCP4L1A6NKN8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCP4L1A6NKN8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCP4L1A6NKN8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCP4L1A6NKN8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PCP4L1A6NKN8 EP400NL-214ENST00000641289 2402 ntBASIC18.75■□□□□ 0.59
PCP4L1A6NKN8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCP4L1A6NKN8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCP4L1A6NKN8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCP4L1A6NKN8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCP4L1A6NKN8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCP4L1A6NKN8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.74■□□□□ 0.59
PCP4L1A6NKN8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCP4L1A6NKN8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCP4L1A6NKN8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PCP4L1A6NKN8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PCP4L1A6NKN8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCP4L1A6NKN8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCP4L1A6NKN8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCP4L1A6NKN8 AL139125.2-201ENST00000623134 1869 ntBASIC18.73■□□□□ 0.59
PCP4L1A6NKN8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.73■□□□□ 0.59
PCP4L1A6NKN8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PCP4L1A6NKN8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCP4L1A6NKN8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.73■□□□□ 0.59
PCP4L1A6NKN8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCP4L1A6NKN8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCP4L1A6NKN8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PCP4L1A6NKN8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCP4L1A6NKN8 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCP4L1A6NKN8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCP4L1A6NKN8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PCP4L1A6NKN8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCP4L1A6NKN8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
PCP4L1A6NKN8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCP4L1A6NKN8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCP4L1A6NKN8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCP4L1A6NKN8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.72■□□□□ 0.59
PCP4L1A6NKN8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCP4L1A6NKN8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PCP4L1A6NKN8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCP4L1A6NKN8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCP4L1A6NKN8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCP4L1A6NKN8 AC073130.3-201ENST00000624389 2278 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms