Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RBFOX3A6NFN3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RBFOX3A6NFN3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RBFOX3A6NFN3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RBFOX3A6NFN3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RBFOX3A6NFN3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RBFOX3A6NFN3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RBFOX3A6NFN3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RBFOX3A6NFN3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RBFOX3A6NFN3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.7■□□□□ 0.58
RBFOX3A6NFN3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RBFOX3A6NFN3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RBFOX3A6NFN3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RBFOX3A6NFN3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RBFOX3A6NFN3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RBFOX3A6NFN3 LINC00565-201ENST00000562710 2331 ntBASIC18.69■□□□□ 0.58
RBFOX3A6NFN3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RBFOX3A6NFN3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RBFOX3A6NFN3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
RBFOX3A6NFN3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RBFOX3A6NFN3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RBFOX3A6NFN3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RBFOX3A6NFN3 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.68■□□□□ 0.58
RBFOX3A6NFN3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.68■□□□□ 0.58
RBFOX3A6NFN3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RBFOX3A6NFN3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RBFOX3A6NFN3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RBFOX3A6NFN3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC18.68■□□□□ 0.58
RBFOX3A6NFN3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RBFOX3A6NFN3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.67■□□□□ 0.58
RBFOX3A6NFN3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RBFOX3A6NFN3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RBFOX3A6NFN3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.67■□□□□ 0.58
RBFOX3A6NFN3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RBFOX3A6NFN3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RBFOX3A6NFN3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RBFOX3A6NFN3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RBFOX3A6NFN3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RBFOX3A6NFN3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RBFOX3A6NFN3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RBFOX3A6NFN3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RBFOX3A6NFN3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.66■□□□□ 0.58
RBFOX3A6NFN3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RBFOX3A6NFN3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
RBFOX3A6NFN3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.66■□□□□ 0.58
RBFOX3A6NFN3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RBFOX3A6NFN3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.65■□□□□ 0.58
RBFOX3A6NFN3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RBFOX3A6NFN3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.65■□□□□ 0.58
RBFOX3A6NFN3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RBFOX3A6NFN3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RBFOX3A6NFN3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RBFOX3A6NFN3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RBFOX3A6NFN3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.65■□□□□ 0.58
RBFOX3A6NFN3 ABCB10P4-201ENST00000566803 2184 ntBASIC18.65■□□□□ 0.58
RBFOX3A6NFN3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.65■□□□□ 0.58
RBFOX3A6NFN3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RBFOX3A6NFN3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RBFOX3A6NFN3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RBFOX3A6NFN3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RBFOX3A6NFN3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RBFOX3A6NFN3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.64■□□□□ 0.57
RBFOX3A6NFN3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RBFOX3A6NFN3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RBFOX3A6NFN3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.64■□□□□ 0.57
RBFOX3A6NFN3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RBFOX3A6NFN3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RBFOX3A6NFN3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RBFOX3A6NFN3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RBFOX3A6NFN3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RBFOX3A6NFN3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RBFOX3A6NFN3 AC004812.2-201ENST00000611079 2094 ntBASIC18.64■□□□□ 0.57
RBFOX3A6NFN3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RBFOX3A6NFN3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.64■□□□□ 0.57
RBFOX3A6NFN3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RBFOX3A6NFN3 AL024507.2-201ENST00000606070 2574 ntBASIC18.63■□□□□ 0.57
RBFOX3A6NFN3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RBFOX3A6NFN3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RBFOX3A6NFN3 EP400NL-214ENST00000641289 2402 ntBASIC18.63■□□□□ 0.57
RBFOX3A6NFN3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.63■□□□□ 0.57
RBFOX3A6NFN3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RBFOX3A6NFN3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RBFOX3A6NFN3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RBFOX3A6NFN3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RBFOX3A6NFN3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC18.62■□□□□ 0.57
RBFOX3A6NFN3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RBFOX3A6NFN3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RBFOX3A6NFN3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RBFOX3A6NFN3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RBFOX3A6NFN3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RBFOX3A6NFN3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RBFOX3A6NFN3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RBFOX3A6NFN3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.61■□□□□ 0.57
RBFOX3A6NFN3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RBFOX3A6NFN3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RBFOX3A6NFN3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RBFOX3A6NFN3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
RBFOX3A6NFN3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RBFOX3A6NFN3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RBFOX3A6NFN3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms