Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.56
PLEKHD1A6NEE1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC37.26■■■■□ 3.56
PLEKHD1A6NEE1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.56
PLEKHD1A6NEE1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC37.26■■■■□ 3.56
PLEKHD1A6NEE1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.55
PLEKHD1A6NEE1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC37.25■■■■□ 3.55
PLEKHD1A6NEE1 GAK-223ENST00000628912 497 ntTSL 5 BASIC37.25■■■■□ 3.55
PLEKHD1A6NEE1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC37.25■■■■□ 3.55
PLEKHD1A6NEE1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
PLEKHD1A6NEE1 AC096631.2-201ENST00000436136 790 ntBASIC37.24■■■■□ 3.55
PLEKHD1A6NEE1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC37.24■■■■□ 3.55
PLEKHD1A6NEE1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC37.24■■■■□ 3.55
PLEKHD1A6NEE1 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
PLEKHD1A6NEE1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC37.24■■■■□ 3.55
PLEKHD1A6NEE1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
PLEKHD1A6NEE1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC37.23■■■■□ 3.55
PLEKHD1A6NEE1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC37.23■■■■□ 3.55
PLEKHD1A6NEE1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC37.23■■■■□ 3.55
PLEKHD1A6NEE1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC37.23■■■■□ 3.55
PLEKHD1A6NEE1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC37.23■■■■□ 3.55
PLEKHD1A6NEE1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
PLEKHD1A6NEE1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC37.22■■■■□ 3.55
PLEKHD1A6NEE1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC37.22■■■■□ 3.55
PLEKHD1A6NEE1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC37.22■■■■□ 3.55
PLEKHD1A6NEE1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC37.22■■■■□ 3.55
PLEKHD1A6NEE1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC37.21■■■■□ 3.55
PLEKHD1A6NEE1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC37.21■■■■□ 3.55
PLEKHD1A6NEE1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC37.21■■■■□ 3.55
PLEKHD1A6NEE1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC37.21■■■■□ 3.55
PLEKHD1A6NEE1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC37.21■■■■□ 3.55
PLEKHD1A6NEE1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC37.2■■■■□ 3.55
PLEKHD1A6NEE1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC37.2■■■■□ 3.55
PLEKHD1A6NEE1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC37.2■■■■□ 3.54
PLEKHD1A6NEE1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC37.19■■■■□ 3.54
PLEKHD1A6NEE1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC37.19■■■■□ 3.54
PLEKHD1A6NEE1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC37.18■■■■□ 3.54
PLEKHD1A6NEE1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC37.18■■■■□ 3.54
PLEKHD1A6NEE1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC37.18■■■■□ 3.54
PLEKHD1A6NEE1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC37.18■■■■□ 3.54
PLEKHD1A6NEE1 AC133561.4-201ENST00000566112 224 ntBASIC37.18■■■■□ 3.54
PLEKHD1A6NEE1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC37.18■■■■□ 3.54
PLEKHD1A6NEE1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC37.18■■■■□ 3.54
PLEKHD1A6NEE1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC37.17■■■■□ 3.54
PLEKHD1A6NEE1 AL512631.2-201ENST00000604634 923 ntBASIC37.17■■■■□ 3.54
PLEKHD1A6NEE1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC37.15■■■■□ 3.54
PLEKHD1A6NEE1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
PLEKHD1A6NEE1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
PLEKHD1A6NEE1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC37.15■■■■□ 3.54
PLEKHD1A6NEE1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
PLEKHD1A6NEE1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC37.14■■■■□ 3.54
PLEKHD1A6NEE1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC37.14■■■■□ 3.54
PLEKHD1A6NEE1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC37.14■■■■□ 3.54
PLEKHD1A6NEE1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC37.13■■■■□ 3.54
PLEKHD1A6NEE1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC37.13■■■■□ 3.54
PLEKHD1A6NEE1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC37.12■■■■□ 3.53
PLEKHD1A6NEE1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC37.12■■■■□ 3.53
PLEKHD1A6NEE1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC37.12■■■■□ 3.53
PLEKHD1A6NEE1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC37.12■■■■□ 3.53
PLEKHD1A6NEE1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC37.12■■■■□ 3.53
PLEKHD1A6NEE1 AP004609.3-201ENST00000610705 1884 ntBASIC37.11■■■■□ 3.53
PLEKHD1A6NEE1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC37.11■■■■□ 3.53
PLEKHD1A6NEE1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC37.11■■■■□ 3.53
PLEKHD1A6NEE1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC37.11■■■■□ 3.53
PLEKHD1A6NEE1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC37.11■■■■□ 3.53
PLEKHD1A6NEE1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC37.11■■■■□ 3.53
PLEKHD1A6NEE1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC37.11■■■■□ 3.53
PLEKHD1A6NEE1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC37.11■■■■□ 3.53
PLEKHD1A6NEE1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC37.1■■■■□ 3.53
PLEKHD1A6NEE1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC37.1■■■■□ 3.53
PLEKHD1A6NEE1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC37.1■■■■□ 3.53
PLEKHD1A6NEE1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC37.1■■■■□ 3.53
PLEKHD1A6NEE1 AK3-203ENST00000447596 705 ntTSL 2 BASIC37.09■■■■□ 3.53
PLEKHD1A6NEE1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC37.09■■■■□ 3.53
PLEKHD1A6NEE1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC37.09■■■■□ 3.53
PLEKHD1A6NEE1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
PLEKHD1A6NEE1 RASSF1-AS1-201ENST00000629828 790 ntBASIC37.07■■■■□ 3.52
PLEKHD1A6NEE1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC37.07■■■■□ 3.52
PLEKHD1A6NEE1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC37.06■■■■□ 3.52
PLEKHD1A6NEE1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC37.06■■■■□ 3.52
PLEKHD1A6NEE1 AF131216.4-201ENST00000638924 1588 ntBASIC37.06■■■■□ 3.52
PLEKHD1A6NEE1 AC139426.1-201ENST00000568218 2529 ntBASIC37.06■■■■□ 3.52
PLEKHD1A6NEE1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC37.06■■■■□ 3.52
PLEKHD1A6NEE1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC37.05■■■■□ 3.52
PLEKHD1A6NEE1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC37.05■■■■□ 3.52
PLEKHD1A6NEE1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC37.04■■■■□ 3.52
PLEKHD1A6NEE1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC37.04■■■■□ 3.52
PLEKHD1A6NEE1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC37.04■■■■□ 3.52
PLEKHD1A6NEE1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC37.04■■■■□ 3.52
PLEKHD1A6NEE1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC37.04■■■■□ 3.52
PLEKHD1A6NEE1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
PLEKHD1A6NEE1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
PLEKHD1A6NEE1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC37.03■■■■□ 3.52
PLEKHD1A6NEE1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
PLEKHD1A6NEE1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC37.02■■■■□ 3.52
PLEKHD1A6NEE1 CD72-202ENST00000378430 585 ntTSL 3 BASIC37.02■■■■□ 3.52
PLEKHD1A6NEE1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC37.02■■■■□ 3.52
PLEKHD1A6NEE1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC37.02■■■■□ 3.52
PLEKHD1A6NEE1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
PLEKHD1A6NEE1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC37.01■■■■□ 3.52
PLEKHD1A6NEE1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC37.01■■■■□ 3.52
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms