Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.09■□□□□ 0.97
MBD3L4A6NDZ8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MBD3L4A6NDZ8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
MBD3L4A6NDZ8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.08■□□□□ 0.97
MBD3L4A6NDZ8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MBD3L4A6NDZ8 AC011551.1-201ENST00000614101 683 ntBASIC21.08■□□□□ 0.97
MBD3L4A6NDZ8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
MBD3L4A6NDZ8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MBD3L4A6NDZ8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MBD3L4A6NDZ8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.08■□□□□ 0.96
MBD3L4A6NDZ8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MBD3L4A6NDZ8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
MBD3L4A6NDZ8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MBD3L4A6NDZ8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.07■□□□□ 0.96
MBD3L4A6NDZ8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.07■□□□□ 0.96
MBD3L4A6NDZ8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MBD3L4A6NDZ8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MBD3L4A6NDZ8 AC131212.1-201ENST00000613771 668 ntBASIC21.07■□□□□ 0.96
MBD3L4A6NDZ8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MBD3L4A6NDZ8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MBD3L4A6NDZ8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MBD3L4A6NDZ8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MBD3L4A6NDZ8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.06■□□□□ 0.96
MBD3L4A6NDZ8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.06■□□□□ 0.96
MBD3L4A6NDZ8 MIR4281-201ENST00000580852 62 ntBASIC21.06■□□□□ 0.96
MBD3L4A6NDZ8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.06■□□□□ 0.96
MBD3L4A6NDZ8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.05■□□□□ 0.96
MBD3L4A6NDZ8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
MBD3L4A6NDZ8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.05■□□□□ 0.96
MBD3L4A6NDZ8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD3L4A6NDZ8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
MBD3L4A6NDZ8 AC021242.3-201ENST00000607598 1377 ntBASIC21.05■□□□□ 0.96
MBD3L4A6NDZ8 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD3L4A6NDZ8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD3L4A6NDZ8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MBD3L4A6NDZ8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.04■□□□□ 0.96
MBD3L4A6NDZ8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.04■□□□□ 0.96
MBD3L4A6NDZ8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MBD3L4A6NDZ8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MBD3L4A6NDZ8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.04■□□□□ 0.96
MBD3L4A6NDZ8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MBD3L4A6NDZ8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MBD3L4A6NDZ8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MBD3L4A6NDZ8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MBD3L4A6NDZ8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.04■□□□□ 0.96
MBD3L4A6NDZ8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MBD3L4A6NDZ8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MBD3L4A6NDZ8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MBD3L4A6NDZ8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.03■□□□□ 0.96
MBD3L4A6NDZ8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.03■□□□□ 0.96
MBD3L4A6NDZ8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.03■□□□□ 0.96
MBD3L4A6NDZ8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.03■□□□□ 0.96
MBD3L4A6NDZ8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.03■□□□□ 0.96
MBD3L4A6NDZ8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
MBD3L4A6NDZ8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
MBD3L4A6NDZ8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MBD3L4A6NDZ8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MBD3L4A6NDZ8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
MBD3L4A6NDZ8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.02■□□□□ 0.96
MBD3L4A6NDZ8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.02■□□□□ 0.96
MBD3L4A6NDZ8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MBD3L4A6NDZ8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
MBD3L4A6NDZ8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
MBD3L4A6NDZ8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MBD3L4A6NDZ8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.01■□□□□ 0.95
MBD3L4A6NDZ8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MBD3L4A6NDZ8 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.01■□□□□ 0.95
MBD3L4A6NDZ8 FOXO3B-201ENST00000395675 1928 ntBASIC21.01■□□□□ 0.95
MBD3L4A6NDZ8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.01■□□□□ 0.95
MBD3L4A6NDZ8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.01■□□□□ 0.95
MBD3L4A6NDZ8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21■□□□□ 0.95
MBD3L4A6NDZ8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
MBD3L4A6NDZ8 AC096887.2-201ENST00000623443 1957 ntBASIC21■□□□□ 0.95
MBD3L4A6NDZ8 GRAMD4P7-201ENST00000578182 1232 ntBASIC21■□□□□ 0.95
MBD3L4A6NDZ8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21■□□□□ 0.95
MBD3L4A6NDZ8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21■□□□□ 0.95
MBD3L4A6NDZ8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MBD3L4A6NDZ8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MBD3L4A6NDZ8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MBD3L4A6NDZ8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.99■□□□□ 0.95
MBD3L4A6NDZ8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MBD3L4A6NDZ8 UNC93B8-201ENST00000511903 705 ntBASIC20.99■□□□□ 0.95
MBD3L4A6NDZ8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.99■□□□□ 0.95
MBD3L4A6NDZ8 ERN1-208ENST00000606895 2068 ntBASIC20.99■□□□□ 0.95
MBD3L4A6NDZ8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.99■□□□□ 0.95
MBD3L4A6NDZ8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MBD3L4A6NDZ8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
MBD3L4A6NDZ8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MBD3L4A6NDZ8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
MBD3L4A6NDZ8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.98■□□□□ 0.95
MBD3L4A6NDZ8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MBD3L4A6NDZ8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MBD3L4A6NDZ8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.98■□□□□ 0.95
MBD3L4A6NDZ8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MBD3L4A6NDZ8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD3L4A6NDZ8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.97■□□□□ 0.95
MBD3L4A6NDZ8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MBD3L4A6NDZ8 AC097639.1-201ENST00000565519 1891 ntBASIC20.97■□□□□ 0.95
MBD3L4A6NDZ8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.97■□□□□ 0.95
MBD3L4A6NDZ8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms