Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AL451085.2-201ENST00000605085 799 ntBASIC17.15■□□□□ 0.34
IGHV4-28A0A0C4DH34 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC17.15■□□□□ 0.34
IGHV4-28A0A0C4DH34 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
IGHV4-28A0A0C4DH34 AC092803.2-201ENST00000564287 1899 ntBASIC17.14■□□□□ 0.33
IGHV4-28A0A0C4DH34 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IGHV4-28A0A0C4DH34 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
IGHV4-28A0A0C4DH34 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
IGHV4-28A0A0C4DH34 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.14■□□□□ 0.33
IGHV4-28A0A0C4DH34 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IGHV4-28A0A0C4DH34 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.14■□□□□ 0.33
IGHV4-28A0A0C4DH34 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IGHV4-28A0A0C4DH34 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
IGHV4-28A0A0C4DH34 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.14■□□□□ 0.33
IGHV4-28A0A0C4DH34 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IGHV4-28A0A0C4DH34 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IGHV4-28A0A0C4DH34 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.13■□□□□ 0.33
IGHV4-28A0A0C4DH34 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.13■□□□□ 0.33
IGHV4-28A0A0C4DH34 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IGHV4-28A0A0C4DH34 AC103724.3-201ENST00000564481 992 ntBASIC17.13■□□□□ 0.33
IGHV4-28A0A0C4DH34 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.13■□□□□ 0.33
IGHV4-28A0A0C4DH34 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IGHV4-28A0A0C4DH34 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IGHV4-28A0A0C4DH34 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IGHV4-28A0A0C4DH34 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
IGHV4-28A0A0C4DH34 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IGHV4-28A0A0C4DH34 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IGHV4-28A0A0C4DH34 AC010501.1-201ENST00000606270 1962 ntBASIC17.12■□□□□ 0.33
IGHV4-28A0A0C4DH34 AL031848.2-201ENST00000607670 837 ntBASIC17.12■□□□□ 0.33
IGHV4-28A0A0C4DH34 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.12■□□□□ 0.33
IGHV4-28A0A0C4DH34 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IGHV4-28A0A0C4DH34 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IGHV4-28A0A0C4DH34 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
IGHV4-28A0A0C4DH34 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IGHV4-28A0A0C4DH34 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IGHV4-28A0A0C4DH34 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IGHV4-28A0A0C4DH34 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.12■□□□□ 0.33
IGHV4-28A0A0C4DH34 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IGHV4-28A0A0C4DH34 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
IGHV4-28A0A0C4DH34 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
IGHV4-28A0A0C4DH34 AC096887.2-201ENST00000623443 1957 ntBASIC17.11■□□□□ 0.33
IGHV4-28A0A0C4DH34 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IGHV4-28A0A0C4DH34 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
IGHV4-28A0A0C4DH34 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
IGHV4-28A0A0C4DH34 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IGHV4-28A0A0C4DH34 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IGHV4-28A0A0C4DH34 AC022616.5-201ENST00000518796 181 ntBASIC17.11■□□□□ 0.33
IGHV4-28A0A0C4DH34 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IGHV4-28A0A0C4DH34 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IGHV4-28A0A0C4DH34 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.1■□□□□ 0.33
IGHV4-28A0A0C4DH34 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IGHV4-28A0A0C4DH34 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IGHV4-28A0A0C4DH34 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IGHV4-28A0A0C4DH34 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.1■□□□□ 0.33
IGHV4-28A0A0C4DH34 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IGHV4-28A0A0C4DH34 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.1■□□□□ 0.33
IGHV4-28A0A0C4DH34 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.1■□□□□ 0.33
IGHV4-28A0A0C4DH34 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
IGHV4-28A0A0C4DH34 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
IGHV4-28A0A0C4DH34 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
IGHV4-28A0A0C4DH34 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IGHV4-28A0A0C4DH34 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.1■□□□□ 0.33
IGHV4-28A0A0C4DH34 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
IGHV4-28A0A0C4DH34 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IGHV4-28A0A0C4DH34 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IGHV4-28A0A0C4DH34 AL035685.1-201ENST00000636663 812 ntBASIC17.09■□□□□ 0.33
IGHV4-28A0A0C4DH34 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IGHV4-28A0A0C4DH34 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.09■□□□□ 0.33
IGHV4-28A0A0C4DH34 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC17.09■□□□□ 0.33
IGHV4-28A0A0C4DH34 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IGHV4-28A0A0C4DH34 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.08■□□□□ 0.33
IGHV4-28A0A0C4DH34 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
IGHV4-28A0A0C4DH34 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IGHV4-28A0A0C4DH34 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IGHV4-28A0A0C4DH34 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IGHV4-28A0A0C4DH34 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
IGHV4-28A0A0C4DH34 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IGHV4-28A0A0C4DH34 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IGHV4-28A0A0C4DH34 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
IGHV4-28A0A0C4DH34 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.07■□□□□ 0.32
IGHV4-28A0A0C4DH34 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
IGHV4-28A0A0C4DH34 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
IGHV4-28A0A0C4DH34 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IGHV4-28A0A0C4DH34 AL592295.1-201ENST00000400984 884 ntBASIC17.07■□□□□ 0.32
IGHV4-28A0A0C4DH34 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.07■□□□□ 0.32
IGHV4-28A0A0C4DH34 AC009299.2-201ENST00000482477 511 ntBASIC17.07■□□□□ 0.32
IGHV4-28A0A0C4DH34 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IGHV4-28A0A0C4DH34 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IGHV4-28A0A0C4DH34 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
IGHV4-28A0A0C4DH34 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IGHV4-28A0A0C4DH34 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
IGHV4-28A0A0C4DH34 AC097639.1-201ENST00000565519 1891 ntBASIC17.06■□□□□ 0.32
IGHV4-28A0A0C4DH34 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
IGHV4-28A0A0C4DH34 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC17.06■□□□□ 0.32
IGHV4-28A0A0C4DH34 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC17.06■□□□□ 0.32
IGHV4-28A0A0C4DH34 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IGHV4-28A0A0C4DH34 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
IGHV4-28A0A0C4DH34 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
IGHV4-28A0A0C4DH34 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
IGHV4-28A0A0C4DH34 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IGHV4-28A0A0C4DH34 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms