Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV12-3A0A0B4J271 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV12-3A0A0B4J271 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV12-3A0A0B4J271 RP9P-202ENST00000450133 1212 ntBASIC17.54■□□□□ 0.4
TRAV12-3A0A0B4J271 MIR4449-201ENST00000578365 66 ntBASIC17.54■□□□□ 0.4
TRAV12-3A0A0B4J271 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV12-3A0A0B4J271 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TRAV12-3A0A0B4J271 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV12-3A0A0B4J271 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV12-3A0A0B4J271 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV12-3A0A0B4J271 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV12-3A0A0B4J271 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV12-3A0A0B4J271 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV12-3A0A0B4J271 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV12-3A0A0B4J271 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV12-3A0A0B4J271 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV12-3A0A0B4J271 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.53■□□□□ 0.4
TRAV12-3A0A0B4J271 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV12-3A0A0B4J271 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.53■□□□□ 0.4
TRAV12-3A0A0B4J271 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV12-3A0A0B4J271 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TRAV12-3A0A0B4J271 GPX1-201ENST00000419349 1106 ntBASIC17.52■□□□□ 0.4
TRAV12-3A0A0B4J271 AC093536.1-201ENST00000569153 554 ntBASIC17.52■□□□□ 0.4
TRAV12-3A0A0B4J271 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAV12-3A0A0B4J271 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV12-3A0A0B4J271 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV12-3A0A0B4J271 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV12-3A0A0B4J271 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV12-3A0A0B4J271 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRAV12-3A0A0B4J271 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV12-3A0A0B4J271 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV12-3A0A0B4J271 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV12-3A0A0B4J271 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRAV12-3A0A0B4J271 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV12-3A0A0B4J271 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV12-3A0A0B4J271 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV12-3A0A0B4J271 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV12-3A0A0B4J271 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV12-3A0A0B4J271 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV12-3A0A0B4J271 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV12-3A0A0B4J271 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV12-3A0A0B4J271 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV12-3A0A0B4J271 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV12-3A0A0B4J271 AC093323.1-202ENST00000635031 2045 ntBASIC17.5■□□□□ 0.39
TRAV12-3A0A0B4J271 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV12-3A0A0B4J271 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV12-3A0A0B4J271 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV12-3A0A0B4J271 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV12-3A0A0B4J271 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV12-3A0A0B4J271 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV12-3A0A0B4J271 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV12-3A0A0B4J271 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAV12-3A0A0B4J271 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV12-3A0A0B4J271 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV12-3A0A0B4J271 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV12-3A0A0B4J271 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRAV12-3A0A0B4J271 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAV12-3A0A0B4J271 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV12-3A0A0B4J271 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRAV12-3A0A0B4J271 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TRAV12-3A0A0B4J271 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV12-3A0A0B4J271 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV12-3A0A0B4J271 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV12-3A0A0B4J271 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
TRAV12-3A0A0B4J271 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC17.49■□□□□ 0.39
TRAV12-3A0A0B4J271 AC007029.1-201ENST00000604183 313 ntBASIC17.49■□□□□ 0.39
TRAV12-3A0A0B4J271 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV12-3A0A0B4J271 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV12-3A0A0B4J271 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV12-3A0A0B4J271 SLC6A10P-202ENST00000431994 2058 ntBASIC17.49■□□□□ 0.39
TRAV12-3A0A0B4J271 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV12-3A0A0B4J271 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV12-3A0A0B4J271 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV12-3A0A0B4J271 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV12-3A0A0B4J271 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV12-3A0A0B4J271 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV12-3A0A0B4J271 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
TRAV12-3A0A0B4J271 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV12-3A0A0B4J271 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV12-3A0A0B4J271 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV12-3A0A0B4J271 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRAV12-3A0A0B4J271 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV12-3A0A0B4J271 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV12-3A0A0B4J271 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAV12-3A0A0B4J271 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV12-3A0A0B4J271 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV12-3A0A0B4J271 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV12-3A0A0B4J271 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV12-3A0A0B4J271 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV12-3A0A0B4J271 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TRAV12-3A0A0B4J271 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV12-3A0A0B4J271 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV12-3A0A0B4J271 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TRAV12-3A0A0B4J271 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV12-3A0A0B4J271 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV12-3A0A0B4J271 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV12-3A0A0B4J271 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAV12-3A0A0B4J271 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV12-3A0A0B4J271 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
TRAV12-3A0A0B4J271 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms