Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV2A0A0B4J234 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRAV2A0A0B4J234 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV2A0A0B4J234 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV2A0A0B4J234 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRAV2A0A0B4J234 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TRAV2A0A0B4J234 RPS2P7-201ENST00000447334 885 ntBASIC17.85■□□□□ 0.45
TRAV2A0A0B4J234 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV2A0A0B4J234 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAV2A0A0B4J234 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV2A0A0B4J234 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV2A0A0B4J234 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRAV2A0A0B4J234 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV2A0A0B4J234 SPCS2P3-201ENST00000500401 656 ntBASIC17.84■□□□□ 0.45
TRAV2A0A0B4J234 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TRAV2A0A0B4J234 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRAV2A0A0B4J234 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV2A0A0B4J234 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV2A0A0B4J234 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
TRAV2A0A0B4J234 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV2A0A0B4J234 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV2A0A0B4J234 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV2A0A0B4J234 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAV2A0A0B4J234 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.83■□□□□ 0.44
TRAV2A0A0B4J234 AC087393.1-201ENST00000582896 145 ntBASIC17.83■□□□□ 0.44
TRAV2A0A0B4J234 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
TRAV2A0A0B4J234 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV2A0A0B4J234 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV2A0A0B4J234 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV2A0A0B4J234 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV2A0A0B4J234 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV2A0A0B4J234 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
TRAV2A0A0B4J234 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV2A0A0B4J234 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV2A0A0B4J234 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV2A0A0B4J234 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV2A0A0B4J234 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV2A0A0B4J234 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV2A0A0B4J234 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV2A0A0B4J234 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV2A0A0B4J234 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV2A0A0B4J234 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV2A0A0B4J234 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV2A0A0B4J234 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.8■□□□□ 0.44
TRAV2A0A0B4J234 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV2A0A0B4J234 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV2A0A0B4J234 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.8■□□□□ 0.44
TRAV2A0A0B4J234 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV2A0A0B4J234 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
TRAV2A0A0B4J234 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV2A0A0B4J234 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV2A0A0B4J234 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TRAV2A0A0B4J234 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TRAV2A0A0B4J234 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV2A0A0B4J234 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV2A0A0B4J234 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV2A0A0B4J234 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV2A0A0B4J234 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV2A0A0B4J234 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC17.79■□□□□ 0.44
TRAV2A0A0B4J234 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV2A0A0B4J234 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
TRAV2A0A0B4J234 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV2A0A0B4J234 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.79■□□□□ 0.44
TRAV2A0A0B4J234 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV2A0A0B4J234 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV2A0A0B4J234 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV2A0A0B4J234 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.78■□□□□ 0.44
TRAV2A0A0B4J234 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV2A0A0B4J234 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRAV2A0A0B4J234 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV2A0A0B4J234 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.78■□□□□ 0.44
TRAV2A0A0B4J234 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAV2A0A0B4J234 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV2A0A0B4J234 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
TRAV2A0A0B4J234 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV2A0A0B4J234 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV2A0A0B4J234 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.78■□□□□ 0.44
TRAV2A0A0B4J234 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TRAV2A0A0B4J234 AC074183.2-201ENST00000623112 922 ntBASIC17.78■□□□□ 0.44
TRAV2A0A0B4J234 AC012354.3-201ENST00000623734 483 ntBASIC17.78■□□□□ 0.44
TRAV2A0A0B4J234 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV2A0A0B4J234 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.78■□□□□ 0.44
TRAV2A0A0B4J234 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV2A0A0B4J234 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAV2A0A0B4J234 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV2A0A0B4J234 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TRAV2A0A0B4J234 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV2A0A0B4J234 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV2A0A0B4J234 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV2A0A0B4J234 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV2A0A0B4J234 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV2A0A0B4J234 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV2A0A0B4J234 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV2A0A0B4J234 TSPY13P-201ENST00000338964 914 ntBASIC17.76■□□□□ 0.43
TRAV2A0A0B4J234 ATP5G2P3-201ENST00000429083 425 ntBASIC17.76■□□□□ 0.43
TRAV2A0A0B4J234 AC019171.1-201ENST00000601251 1056 ntBASIC17.76■□□□□ 0.43
TRAV2A0A0B4J234 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRAV2A0A0B4J234 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.76■□□□□ 0.43
TRAV2A0A0B4J234 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV2A0A0B4J234 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms