Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TNFSF12-TNFSF13A0A0A6YY99 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFSF12-TNFSF13A0A0A6YY99 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.6■■□□□ 1.05
TNFSF12-TNFSF13A0A0A6YY99 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFSF12-TNFSF13A0A0A6YY99 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TNFSF12-TNFSF13A0A0A6YY99 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFSF12-TNFSF13A0A0A6YY99 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
TNFSF12-TNFSF13A0A0A6YY99 RARRES2P1-201ENST00000474487 481 ntBASIC21.6■■□□□ 1.05
TNFSF12-TNFSF13A0A0A6YY99 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.6■■□□□ 1.05
TNFSF12-TNFSF13A0A0A6YY99 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.6■■□□□ 1.05
TNFSF12-TNFSF13A0A0A6YY99 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFSF12-TNFSF13A0A0A6YY99 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFSF12-TNFSF13A0A0A6YY99 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFSF12-TNFSF13A0A0A6YY99 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TNFSF12-TNFSF13A0A0A6YY99 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.59■■□□□ 1.05
TNFSF12-TNFSF13A0A0A6YY99 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TNFSF12-TNFSF13A0A0A6YY99 RPS2P7-201ENST00000447334 885 ntBASIC21.59■■□□□ 1.05
TNFSF12-TNFSF13A0A0A6YY99 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TNFSF12-TNFSF13A0A0A6YY99 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.59■■□□□ 1.05
TNFSF12-TNFSF13A0A0A6YY99 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TNFSF12-TNFSF13A0A0A6YY99 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TNFSF12-TNFSF13A0A0A6YY99 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TNFSF12-TNFSF13A0A0A6YY99 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TNFSF12-TNFSF13A0A0A6YY99 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TNFSF12-TNFSF13A0A0A6YY99 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.58■■□□□ 1.05
TNFSF12-TNFSF13A0A0A6YY99 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.57■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.56■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 AC087393.1-201ENST00000582896 145 ntBASIC21.56■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.56■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.55■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 BHLHE23-202ENST00000612929 1109 ntBASIC21.55■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.55■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.54■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.54■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.53■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 AC010980.1-201ENST00000587192 1142 ntBASIC21.53■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 AC074183.2-201ENST00000623112 922 ntBASIC21.53■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.53■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 AC020928.2-201ENST00000588717 2197 ntBASIC21.53■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.52■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 AC139795.1-202ENST00000500444 432 ntBASIC21.52■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.52■■□□□ 1.04
TNFSF12-TNFSF13A0A0A6YY99 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.51■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.51■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.5■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.49■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.48■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.48■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.48■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TNFSF12-TNFSF13A0A0A6YY99 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms