Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC26.86■■□□□ 1.89
BIVM-ERCC5R4GMW8 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC26.86■■□□□ 1.89
BIVM-ERCC5R4GMW8 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC26.86■■□□□ 1.89
BIVM-ERCC5R4GMW8 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC26.86■■□□□ 1.89
BIVM-ERCC5R4GMW8 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC26.86■■□□□ 1.89
BIVM-ERCC5R4GMW8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC26.86■■□□□ 1.89
BIVM-ERCC5R4GMW8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC26.86■■□□□ 1.89
BIVM-ERCC5R4GMW8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC26.86■■□□□ 1.89
BIVM-ERCC5R4GMW8 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC26.86■■□□□ 1.89
BIVM-ERCC5R4GMW8 AC093525.8-201ENST00000624099 1342 ntBASIC26.86■■□□□ 1.89
BIVM-ERCC5R4GMW8 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC26.86■■□□□ 1.89
BIVM-ERCC5R4GMW8 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC26.85■■□□□ 1.89
BIVM-ERCC5R4GMW8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC26.85■■□□□ 1.89
BIVM-ERCC5R4GMW8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
BIVM-ERCC5R4GMW8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC26.85■■□□□ 1.89
BIVM-ERCC5R4GMW8 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
BIVM-ERCC5R4GMW8 APRT-204ENST00000563655 709 ntTSL 5 BASIC26.85■■□□□ 1.89
BIVM-ERCC5R4GMW8 BTNL10-201ENST00000595971 695 ntBASIC26.85■■□□□ 1.89
BIVM-ERCC5R4GMW8 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC26.85■■□□□ 1.89
BIVM-ERCC5R4GMW8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
BIVM-ERCC5R4GMW8 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC26.85■■□□□ 1.89
BIVM-ERCC5R4GMW8 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
BIVM-ERCC5R4GMW8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 USP40-206ENST00000443711 628 ntTSL 2 BASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 CSF2RBP1-201ENST00000447905 391 ntBASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 TDH-203ENST00000531764 1110 ntBASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 AL583810.1-201ENST00000553344 1045 ntBASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 AP001094.4-201ENST00000579008 2176 ntBASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 ZBTB45P2-201ENST00000452245 1531 ntBASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 AL133373.2-201ENST00000623187 2828 ntBASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 RNF216P1-203ENST00000404404 2427 ntBASIC26.84■■□□□ 1.89
BIVM-ERCC5R4GMW8 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC26.83■■□□□ 1.89
BIVM-ERCC5R4GMW8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC26.83■■□□□ 1.89
BIVM-ERCC5R4GMW8 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
BIVM-ERCC5R4GMW8 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC26.83■■□□□ 1.89
BIVM-ERCC5R4GMW8 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
BIVM-ERCC5R4GMW8 AC012441.1-201ENST00000446669 685 ntBASIC26.83■■□□□ 1.89
BIVM-ERCC5R4GMW8 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC26.83■■□□□ 1.89
BIVM-ERCC5R4GMW8 AC133539.2-201ENST00000604757 467 ntBASIC26.83■■□□□ 1.89
BIVM-ERCC5R4GMW8 RERG-209ENST00000546331 1383 ntTSL 2 BASIC26.83■■□□□ 1.89
BIVM-ERCC5R4GMW8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC26.83■■□□□ 1.89
BIVM-ERCC5R4GMW8 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC26.83■■□□□ 1.89
BIVM-ERCC5R4GMW8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
BIVM-ERCC5R4GMW8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC26.83■■□□□ 1.89
BIVM-ERCC5R4GMW8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
BIVM-ERCC5R4GMW8 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC26.83■■□□□ 1.89
BIVM-ERCC5R4GMW8 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
BIVM-ERCC5R4GMW8 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC26.83■■□□□ 1.88
BIVM-ERCC5R4GMW8 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC26.83■■□□□ 1.88
BIVM-ERCC5R4GMW8 RPL7P3-201ENST00000441388 714 ntBASIC26.83■■□□□ 1.88
BIVM-ERCC5R4GMW8 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC26.83■■□□□ 1.88
BIVM-ERCC5R4GMW8 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC26.83■■□□□ 1.88
BIVM-ERCC5R4GMW8 RNA5SP412-201ENST00000516234 123 ntBASIC26.83■■□□□ 1.88
BIVM-ERCC5R4GMW8 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC26.83■■□□□ 1.88
BIVM-ERCC5R4GMW8 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.88
BIVM-ERCC5R4GMW8 AL022328.1-201ENST00000610050 478 ntBASIC26.83■■□□□ 1.88
BIVM-ERCC5R4GMW8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.88
BIVM-ERCC5R4GMW8 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC26.82■■□□□ 1.88
BIVM-ERCC5R4GMW8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
BIVM-ERCC5R4GMW8 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
BIVM-ERCC5R4GMW8 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC26.82■■□□□ 1.88
BIVM-ERCC5R4GMW8 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC26.82■■□□□ 1.88
BIVM-ERCC5R4GMW8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC26.82■■□□□ 1.88
BIVM-ERCC5R4GMW8 AC007613.1-201ENST00000572811 2597 ntBASIC26.82■■□□□ 1.88
BIVM-ERCC5R4GMW8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
BIVM-ERCC5R4GMW8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
BIVM-ERCC5R4GMW8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
BIVM-ERCC5R4GMW8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC26.82■■□□□ 1.88
BIVM-ERCC5R4GMW8 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC26.82■■□□□ 1.88
BIVM-ERCC5R4GMW8 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
BIVM-ERCC5R4GMW8 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC26.82■■□□□ 1.88
BIVM-ERCC5R4GMW8 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
BIVM-ERCC5R4GMW8 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC26.82■■□□□ 1.88
BIVM-ERCC5R4GMW8 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
BIVM-ERCC5R4GMW8 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
BIVM-ERCC5R4GMW8 MIR4538-201ENST00000581377 78 ntBASIC26.82■■□□□ 1.88
BIVM-ERCC5R4GMW8 AC097359.3-201ENST00000603982 1210 ntBASIC26.82■■□□□ 1.88
BIVM-ERCC5R4GMW8 AP001282.1-201ENST00000531301 1499 ntBASIC26.82■■□□□ 1.88
BIVM-ERCC5R4GMW8 MSTO2P-201ENST00000314835 1709 ntBASIC26.82■■□□□ 1.88
BIVM-ERCC5R4GMW8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
BIVM-ERCC5R4GMW8 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms