Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
LINC01558Q9Y6Z2 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.05
LINC01558Q9Y6Z2 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
LINC01558Q9Y6Z2 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
LINC01558Q9Y6Z2 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
LINC01558Q9Y6Z2 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 SRD5A1P1-201ENST00000442297 786 ntBASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 AP001160.3-201ENST00000601484 763 ntBASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 AL591742.1-201ENST00000604433 565 ntBASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 EGFEM1P-202ENST00000431685 1563 ntBASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 LSS-211ENST00000522411 2523 ntTSL 2 BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 CTBP1-AS2-206ENST00000581398 5652 ntBASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LINC01558Q9Y6Z2 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 MPI-203ENST00000535694 1523 ntTSL 2 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 BX276092.7-203ENST00000637198 1536 ntBASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 MST1P2-201ENST00000457982 2291 ntBASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 AOC4P-203ENST00000566825 2289 ntBASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 POU5F1P3-201ENST00000428824 1078 ntBASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 AC103724.3-201ENST00000564481 992 ntBASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 AC010980.1-201ENST00000587192 1142 ntBASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 AC069544.1-201ENST00000609399 999 ntBASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 HADH-212ENST00000638621 741 ntTSL 5 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC8.45□□□□□ -1.06
LINC01558Q9Y6Z2 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms