Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 FO393414.2-201ENST00000405153 598 ntBASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 AL596325.1-201ENST00000563991 1082 ntBASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 AC007541.1-201ENST00000570282 1469 ntBASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 AL391825.1-201ENST00000457671 1364 ntBASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 NME2P1-201ENST00000426182 414 ntBASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HS3ST3A1Q9Y663 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 RNF216P1-203ENST00000404404 2427 ntBASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 LETM1P2-201ENST00000597330 2178 ntBASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 AC087499.6-201ENST00000411576 835 ntBASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 DFFBP1-201ENST00000433250 979 ntBASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 API5-211ENST00000534695 560 ntTSL 5 BASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 AL132655.2-201ENST00000596276 594 ntBASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HS3ST3A1Q9Y663 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms