Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA1Q9Y5H4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
PCDHGA1Q9Y5H4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA1Q9Y5H4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA1Q9Y5H4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA1Q9Y5H4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
PCDHGA1Q9Y5H4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 AL138688.1-201ENST00000624851 1594 ntBASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 AC134043.2-201ENST00000624206 2238 ntBASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 SPDYE18-201ENST00000510091 1050 ntBASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 RRP7BP-205ENST00000566851 833 ntBASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 MIR6069-201ENST00000620069 79 ntBASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PCDHGA1Q9Y5H4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 AC093726.1-201ENST00000608064 963 ntBASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PCDHGA1Q9Y5H4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA1Q9Y5H4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA1Q9Y5H4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGA1Q9Y5H4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA1Q9Y5H4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA1Q9Y5H4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGA1Q9Y5H4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
PCDHGA1Q9Y5H4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA1Q9Y5H4 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
PCDHGA1Q9Y5H4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGA1Q9Y5H4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA1Q9Y5H4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA1Q9Y5H4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA1Q9Y5H4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA1Q9Y5H4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA1Q9Y5H4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGA1Q9Y5H4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PCDHGA1Q9Y5H4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA1Q9Y5H4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA1Q9Y5H4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms