Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 LETM1P2-201ENST00000597330 2178 ntBASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 INE1-201ENST00000456273 945 ntBASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 GPR53P-205ENST00000457298 1084 ntBASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 GIMAP3P-201ENST00000495150 836 ntBASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 SRD5A3P1-201ENST00000603021 949 ntBASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 AC004461.2-201ENST00000629517 803 ntBASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 AC006538.1-201ENST00000567905 1585 ntBASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 GGT4P-201ENST00000623672 1708 ntBASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 AC060834.1-201ENST00000443027 2032 ntBASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 FZD10-202ENST00000539839 3282 ntBASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHB7Q9Y5E2 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 SLC7A15P-201ENST00000424028 1363 ntBASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 U91328.1-201ENST00000437528 223 ntBASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 AC007274.1-201ENST00000439805 662 ntBASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 AC004790.1-201ENST00000612686 536 ntBASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 MIR6752-201ENST00000618442 71 ntBASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PCDHB7Q9Y5E2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHB7Q9Y5E2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHB7Q9Y5E2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHB7Q9Y5E2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHB7Q9Y5E2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHB7Q9Y5E2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.58■□□□□ 0.41
PCDHB7Q9Y5E2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.58■□□□□ 0.41
PCDHB7Q9Y5E2 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHB7Q9Y5E2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB7Q9Y5E2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHB7Q9Y5E2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB7Q9Y5E2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB7Q9Y5E2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHB7Q9Y5E2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB7Q9Y5E2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PCDHB7Q9Y5E2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB7Q9Y5E2 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB7Q9Y5E2 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB7Q9Y5E2 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB7Q9Y5E2 AL512384.1-201ENST00000406683 331 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms