Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 AL662844.4-201ENST00000606367 2838 ntBASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 MKNK2P1-201ENST00000437526 628 ntBASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 AL009183.1-201ENST00000603760 355 ntBASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 ELL2P1-201ENST00000413990 1906 ntBASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RPH3AQ9Y2J0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 AL645939.2-201ENST00000427340 991 ntBASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 COX20P2-201ENST00000452636 358 ntBASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 HLA-J-203ENST00000494367 1087 ntBASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 AC013467.2-201ENST00000605472 835 ntBASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RPH3AQ9Y2J0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms