Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PCDHGC3Q9UN70 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PCDHGC3Q9UN70 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGC3Q9UN70 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGC3Q9UN70 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGC3Q9UN70 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGC3Q9UN70 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PCDHGC3Q9UN70 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
PCDHGC3Q9UN70 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGC3Q9UN70 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
PCDHGC3Q9UN70 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGC3Q9UN70 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 MIR346-201ENST00000362234 95 ntBASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 SPCS2P4-201ENST00000436160 681 ntBASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 AC079140.1-201ENST00000508039 487 ntBASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
PCDHGC3Q9UN70 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 BX842568.4-201ENST00000421222 227 ntBASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 AC142381.1-201ENST00000426099 345 ntBASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 AC245100.5-201ENST00000452108 331 ntBASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 AC098859.1-201ENST00000502915 1238 ntBASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 KRT8P23-201ENST00000560090 1207 ntBASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 SPTSSB-204ENST00000617024 1292 ntBASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 AC084121.4-201ENST00000641598 221 ntBASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 AF228730.8-201ENST00000642140 221 ntBASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGC3Q9UN70 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGC3Q9UN70 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGC3Q9UN70 AL603832.2-201ENST00000566195 2125 ntBASIC17.3■□□□□ 0.36
PCDHGC3Q9UN70 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDHGC3Q9UN70 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PCDHGC3Q9UN70 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGC3Q9UN70 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
PCDHGC3Q9UN70 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGC3Q9UN70 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGC3Q9UN70 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGC3Q9UN70 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGC3Q9UN70 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGC3Q9UN70 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms