Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLN6Q9NWW5 AC211429.1-201ENST00000415277 523 ntBASIC15.1■□□□□ 0.01
CLN6Q9NWW5 LINC00982-205ENST00000420957 435 ntBASIC15.1■□□□□ 0.01
CLN6Q9NWW5 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.1■□□□□ 0.01
CLN6Q9NWW5 BX276092.5-203ENST00000456199 560 ntBASIC15.1■□□□□ 0.01
CLN6Q9NWW5 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.1■□□□□ 0.01
CLN6Q9NWW5 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.1■□□□□ 0.01
CLN6Q9NWW5 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.1■□□□□ 0.01
CLN6Q9NWW5 AP005901.3-202ENST00000581653 237 ntBASIC15.1■□□□□ 0.01
CLN6Q9NWW5 NTF6B-201ENST00000591913 560 ntBASIC15.1■□□□□ 0.01
CLN6Q9NWW5 AL121672.3-201ENST00000608644 468 ntBASIC15.1■□□□□ 0.01
CLN6Q9NWW5 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.1■□□□□ 0.01
CLN6Q9NWW5 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CLN6Q9NWW5 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
CLN6Q9NWW5 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CLN6Q9NWW5 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
CLN6Q9NWW5 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLN6Q9NWW5 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.1■□□□□ 0.01
CLN6Q9NWW5 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLN6Q9NWW5 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CLN6Q9NWW5 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CLN6Q9NWW5 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLN6Q9NWW5 REXO1L8P-201ENST00000604378 1897 ntBASIC15.1■□□□□ 0.01
CLN6Q9NWW5 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 OR2I1P-209ENST00000641730 5365 ntBASIC15.09■□□□□ 0.01
CLN6Q9NWW5 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 LINC01144-201ENST00000626198 1710 ntBASIC15.09■□□□□ 0.01
CLN6Q9NWW5 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 SNX33P1-201ENST00000592116 1762 ntBASIC15.09■□□□□ 0.01
CLN6Q9NWW5 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 DUX4L26-201ENST00000489078 1255 ntBASIC15.09■□□□□ 0.01
CLN6Q9NWW5 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 INTS4P1-201ENST00000438455 1935 ntBASIC15.09■□□□□ 0.01
CLN6Q9NWW5 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CLN6Q9NWW5 KRT8P39-201ENST00000396270 1433 ntBASIC15.09■□□□□ 0.01
CLN6Q9NWW5 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLN6Q9NWW5 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CLN6Q9NWW5 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLN6Q9NWW5 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.08■□□□□ 0.01
CLN6Q9NWW5 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CLN6Q9NWW5 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLN6Q9NWW5 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.08■□□□□ 0.01
CLN6Q9NWW5 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0.01
CLN6Q9NWW5 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLN6Q9NWW5 AC013268.4-201ENST00000637413 2228 ntBASIC15.08■□□□□ 0
CLN6Q9NWW5 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CLN6Q9NWW5 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.08■□□□□ 0
CLN6Q9NWW5 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLN6Q9NWW5 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
CLN6Q9NWW5 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CLN6Q9NWW5 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLN6Q9NWW5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.08■□□□□ 0
CLN6Q9NWW5 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.08■□□□□ 0
CLN6Q9NWW5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.08■□□□□ 0
CLN6Q9NWW5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.08■□□□□ 0
CLN6Q9NWW5 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
CLN6Q9NWW5 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.08■□□□□ 0
CLN6Q9NWW5 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CLN6Q9NWW5 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLN6Q9NWW5 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLN6Q9NWW5 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLN6Q9NWW5 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLN6Q9NWW5 TOP3BP1-201ENST00000420768 1380 ntBASIC15.08■□□□□ 0
CLN6Q9NWW5 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms