Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 AC099336.1-202ENST00000602961 463 ntBASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 AC093458.2-201ENST00000623150 629 ntBASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHB16Q9NRJ7 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 AC126177.1-201ENST00000547829 2218 ntBASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 NPAP1P7-201ENST00000613027 823 ntBASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PCDHB16Q9NRJ7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms