Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 AC126335.2-201ENST00000623362 4637 ntBASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SND1-IT1Q9HBX3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 AC087499.1-201ENST00000418141 1075 ntBASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 AC117947.1-201ENST00000427448 529 ntBASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 AL137013.1-201ENST00000432946 1228 ntBASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 AC005336.2-201ENST00000593183 939 ntBASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 AL592071.1-201ENST00000611956 408 ntBASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 AC124864.1-201ENST00000623408 392 ntBASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 SUPT20HL2-201ENST00000486479 2409 ntBASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 AC132938.5-201ENST00000624980 1813 ntBASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 LINC00895-201ENST00000629028 1637 ntBASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 AC006449.6-201ENST00000612330 2296 ntBASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SND1-IT1Q9HBX3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
SND1-IT1Q9HBX3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
SND1-IT1Q9HBX3 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 PRAL-201ENST00000624952 3286 ntBASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms