Protein–RNA interactions for Protein: Q9H0K1

SIK2, Serine/threonine-protein kinase SIK2, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIK2Q9H0K1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 RN7SL589P-201ENST00000481268 310 ntBASIC17.1■□□□□ 0.33
SIK2Q9H0K1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 SNHG9-202ENST00000564014 471 ntBASIC17.1■□□□□ 0.33
SIK2Q9H0K1 AL138918.1-201ENST00000568306 659 ntBASIC17.1■□□□□ 0.33
SIK2Q9H0K1 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 NFIC-211ENST00000641145 8399 ntBASIC17.09■□□□□ 0.33
SIK2Q9H0K1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 AC004461.1-201ENST00000412461 403 ntBASIC17.09■□□□□ 0.33
SIK2Q9H0K1 AL592309.1-201ENST00000443127 649 ntBASIC17.09■□□□□ 0.33
SIK2Q9H0K1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 DNAJB3-202ENST00000449667 1266 ntBASIC17.09■□□□□ 0.33
SIK2Q9H0K1 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 AC022145.2-201ENST00000598203 171 ntBASIC17.09■□□□□ 0.33
SIK2Q9H0K1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIK2Q9H0K1 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SIK2Q9H0K1 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SIK2Q9H0K1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.08■□□□□ 0.33
SIK2Q9H0K1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SIK2Q9H0K1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SIK2Q9H0K1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SIK2Q9H0K1 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SIK2Q9H0K1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.08■□□□□ 0.33
SIK2Q9H0K1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SIK2Q9H0K1 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SIK2Q9H0K1 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.08■□□□□ 0.33
SIK2Q9H0K1 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SIK2Q9H0K1 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SIK2Q9H0K1 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.08■□□□□ 0.32
SIK2Q9H0K1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SIK2Q9H0K1 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.08■□□□□ 0.32
SIK2Q9H0K1 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIK2Q9H0K1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.08■□□□□ 0.32
SIK2Q9H0K1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.08■□□□□ 0.32
SIK2Q9H0K1 IGHV3-62-201ENST00000520057 340 ntBASIC17.08■□□□□ 0.32
SIK2Q9H0K1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIK2Q9H0K1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SIK2Q9H0K1 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.08■□□□□ 0.32
SIK2Q9H0K1 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.08■□□□□ 0.32
SIK2Q9H0K1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.08■□□□□ 0.32
SIK2Q9H0K1 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.08■□□□□ 0.32
SIK2Q9H0K1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.08■□□□□ 0.32
SIK2Q9H0K1 AC027307.2-201ENST00000591252 911 ntBASIC17.08■□□□□ 0.32
SIK2Q9H0K1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.08■□□□□ 0.32
SIK2Q9H0K1 AL513210.1-201ENST00000629608 234 ntBASIC17.08■□□□□ 0.32
SIK2Q9H0K1 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms