Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM2Q9C040 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM2Q9C040 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.2■□□□□ 0.02
TRIM2Q9C040 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRIM2Q9C040 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRIM2Q9C040 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRIM2Q9C040 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.2■□□□□ 0.02
TRIM2Q9C040 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRIM2Q9C040 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM2Q9C040 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM2Q9C040 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.19■□□□□ 0.02
TRIM2Q9C040 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM2Q9C040 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRIM2Q9C040 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM2Q9C040 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM2Q9C040 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM2Q9C040 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM2Q9C040 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRIM2Q9C040 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.19■□□□□ 0.02
TRIM2Q9C040 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM2Q9C040 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRIM2Q9C040 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM2Q9C040 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM2Q9C040 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM2Q9C040 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM2Q9C040 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TRIM2Q9C040 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM2Q9C040 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.19■□□□□ 0.02
TRIM2Q9C040 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.19■□□□□ 0.02
TRIM2Q9C040 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.19■□□□□ 0.02
TRIM2Q9C040 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM2Q9C040 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.19■□□□□ 0.02
TRIM2Q9C040 AC145285.3-201ENST00000564603 959 ntBASIC15.19■□□□□ 0.02
TRIM2Q9C040 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM2Q9C040 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
TRIM2Q9C040 GPALPP1-207ENST00000611650 899 ntBASIC15.19■□□□□ 0.02
TRIM2Q9C040 AC006538.3-201ENST00000612495 578 ntBASIC15.19■□□□□ 0.02
TRIM2Q9C040 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM2Q9C040 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM2Q9C040 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRIM2Q9C040 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM2Q9C040 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRIM2Q9C040 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM2Q9C040 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM2Q9C040 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.19■□□□□ 0.02
TRIM2Q9C040 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM2Q9C040 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.19■□□□□ 0.02
TRIM2Q9C040 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM2Q9C040 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM2Q9C040 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM2Q9C040 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM2Q9C040 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM2Q9C040 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TRIM2Q9C040 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM2Q9C040 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
TRIM2Q9C040 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.19■□□□□ 0.02
TRIM2Q9C040 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM2Q9C040 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM2Q9C040 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM2Q9C040 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.19■□□□□ 0.02
TRIM2Q9C040 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TRIM2Q9C040 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM2Q9C040 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.18■□□□□ 0.02
TRIM2Q9C040 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM2Q9C040 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRIM2Q9C040 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRIM2Q9C040 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM2Q9C040 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRIM2Q9C040 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM2Q9C040 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM2Q9C040 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM2Q9C040 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.18■□□□□ 0.02
TRIM2Q9C040 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRIM2Q9C040 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM2Q9C040 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.18■□□□□ 0.02
TRIM2Q9C040 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.18■□□□□ 0.02
TRIM2Q9C040 AC098831.1-202ENST00000438821 336 ntBASIC15.18■□□□□ 0.02
TRIM2Q9C040 AC108751.1-201ENST00000490852 363 ntBASIC15.18■□□□□ 0.02
TRIM2Q9C040 CXCL1P1-201ENST00000502804 216 ntBASIC15.18■□□□□ 0.02
TRIM2Q9C040 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.18■□□□□ 0.02
TRIM2Q9C040 MIR4751-201ENST00000578027 74 ntBASIC15.18■□□□□ 0.02
TRIM2Q9C040 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRIM2Q9C040 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRIM2Q9C040 ACTL9-202ENST00000612068 1252 ntBASIC15.18■□□□□ 0.02
TRIM2Q9C040 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRIM2Q9C040 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.18■□□□□ 0.02
TRIM2Q9C040 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM2Q9C040 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM2Q9C040 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM2Q9C040 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.18■□□□□ 0.02
TRIM2Q9C040 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM2Q9C040 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRIM2Q9C040 AC126755.1-201ENST00000525846 6405 ntBASIC15.18■□□□□ 0.02
TRIM2Q9C040 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM2Q9C040 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM2Q9C040 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM2Q9C040 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM2Q9C040 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM2Q9C040 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRIM2Q9C040 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms