Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
UPF3BQ9BZI7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UPF3BQ9BZI7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
UPF3BQ9BZI7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UPF3BQ9BZI7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UPF3BQ9BZI7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
UPF3BQ9BZI7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
UPF3BQ9BZI7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
UPF3BQ9BZI7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UPF3BQ9BZI7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UPF3BQ9BZI7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
UPF3BQ9BZI7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UPF3BQ9BZI7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.67■□□□□ 0.74
UPF3BQ9BZI7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.67■□□□□ 0.74
UPF3BQ9BZI7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
UPF3BQ9BZI7 MIR4515-201ENST00000584082 81 ntBASIC19.67■□□□□ 0.74
UPF3BQ9BZI7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
UPF3BQ9BZI7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UPF3BQ9BZI7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.67■□□□□ 0.74
UPF3BQ9BZI7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UPF3BQ9BZI7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.67■□□□□ 0.74
UPF3BQ9BZI7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UPF3BQ9BZI7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.67■□□□□ 0.74
UPF3BQ9BZI7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 RNU1-129P-201ENST00000384064 167 ntBASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 PRSS29P-201ENST00000440800 595 ntBASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 U1.21-201ENST00000580816 167 ntBASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
UPF3BQ9BZI7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 RNA5SP415-201ENST00000517246 115 ntBASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.65■□□□□ 0.74
UPF3BQ9BZI7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms