Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 AC138035.3-201ENST00000622706 2791 ntBASIC18.73■□□□□ 0.59
CCDC94Q9BW85 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 CRYGEP-201ENST00000412192 528 ntBASIC18.73■□□□□ 0.59
CCDC94Q9BW85 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 AC007967.2-201ENST00000432613 625 ntBASIC18.73■□□□□ 0.59
CCDC94Q9BW85 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 RNA5SP416-201ENST00000516838 111 ntBASIC18.73■□□□□ 0.59
CCDC94Q9BW85 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 PI4KAP1-204ENST00000612579 1703 ntBASIC18.73■□□□□ 0.59
CCDC94Q9BW85 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC94Q9BW85 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 MRPL20P1-201ENST00000400819 433 ntBASIC18.72■□□□□ 0.59
CCDC94Q9BW85 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 PRSS29P-201ENST00000440800 595 ntBASIC18.72■□□□□ 0.59
CCDC94Q9BW85 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 AC004790.2-201ENST00000623588 572 ntBASIC18.72■□□□□ 0.59
CCDC94Q9BW85 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC94Q9BW85 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC94Q9BW85 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CCDC94Q9BW85 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC94Q9BW85 RNF216P1-203ENST00000404404 2427 ntBASIC18.71■□□□□ 0.59
CCDC94Q9BW85 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC94Q9BW85 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC94Q9BW85 AC006058.4-201ENST00000624016 1670 ntBASIC18.71■□□□□ 0.59
CCDC94Q9BW85 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CCDC94Q9BW85 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CCDC94Q9BW85 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC94Q9BW85 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
CCDC94Q9BW85 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.71■□□□□ 0.59
CCDC94Q9BW85 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC94Q9BW85 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.71■□□□□ 0.59
CCDC94Q9BW85 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CCDC94Q9BW85 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC94Q9BW85 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC94Q9BW85 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC94Q9BW85 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC94Q9BW85 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC94Q9BW85 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC94Q9BW85 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC94Q9BW85 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC94Q9BW85 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CCDC94Q9BW85 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CCDC94Q9BW85 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC94Q9BW85 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC94Q9BW85 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms