Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 AL513477.1-201ENST00000602865 2407 ntBASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 CYP2T1P-202ENST00000641596 2535 ntBASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 CRYGEP-201ENST00000412192 528 ntBASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 HCG4-201ENST00000418983 998 ntBASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 FAM185BP-201ENST00000443595 716 ntBASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 CXCL1P1-201ENST00000502804 216 ntBASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
YIPF4Q9BSR8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 AC104109.2-201ENST00000602919 1418 ntBASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 PRSS29P-201ENST00000440800 595 ntBASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 VN2R19P-201ENST00000442399 1052 ntBASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 IGHV3-22-201ENST00000520721 359 ntBASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 AC026691.1-201ENST00000602502 2017 ntBASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 GPAA1P2-202ENST00000606848 1787 ntBASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
YIPF4Q9BSR8 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms