Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.88□□□□□ -0.19
PCGF1Q9BSM1 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 DNAJB3-202ENST00000449667 1266 ntBASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 AC005412.3-201ENST00000580309 715 ntBASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 AL645728.2-201ENST00000641974 660 ntBASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 ELL2P1-201ENST00000413990 1906 ntBASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.87□□□□□ -0.19
PCGF1Q9BSM1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 AC092919.2-201ENST00000623631 1645 ntBASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 AL021920.2-201ENST00000624828 1351 ntBASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 AC112191.1-201ENST00000523689 701 ntBASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 AL031432.2-201ENST00000566714 459 ntBASIC13.86□□□□□ -0.19
PCGF1Q9BSM1 AL928711.1-201ENST00000570165 459 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms