Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PTPN18Q99952 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN18Q99952 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN18Q99952 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN18Q99952 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN18Q99952 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN18Q99952 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN18Q99952 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.59■□□□□ 0.57
PTPN18Q99952 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN18Q99952 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN18Q99952 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
PTPN18Q99952 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN18Q99952 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN18Q99952 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN18Q99952 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.59■□□□□ 0.57
PTPN18Q99952 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN18Q99952 RPL13AP20-201ENST00000459725 609 ntBASIC18.59■□□□□ 0.57
PTPN18Q99952 FAM86LP-201ENST00000478302 853 ntBASIC18.59■□□□□ 0.57
PTPN18Q99952 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.59■□□□□ 0.57
PTPN18Q99952 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN18Q99952 RHOQP1-201ENST00000555758 579 ntBASIC18.59■□□□□ 0.57
PTPN18Q99952 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.59■□□□□ 0.57
PTPN18Q99952 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.59■□□□□ 0.57
PTPN18Q99952 AC243960.2-201ENST00000600996 747 ntBASIC18.59■□□□□ 0.57
PTPN18Q99952 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN18Q99952 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC18.59■□□□□ 0.57
PTPN18Q99952 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN18Q99952 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN18Q99952 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN18Q99952 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN18Q99952 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN18Q99952 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.59■□□□□ 0.57
PTPN18Q99952 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN18Q99952 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN18Q99952 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN18Q99952 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN18Q99952 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN18Q99952 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN18Q99952 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.58■□□□□ 0.57
PTPN18Q99952 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN18Q99952 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
PTPN18Q99952 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.58■□□□□ 0.57
PTPN18Q99952 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN18Q99952 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN18Q99952 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN18Q99952 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN18Q99952 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PTPN18Q99952 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN18Q99952 ELK2AP-201ENST00000392510 1007 ntBASIC18.58■□□□□ 0.56
PTPN18Q99952 AC074338.1-201ENST00000416825 156 ntBASIC18.58■□□□□ 0.56
PTPN18Q99952 AC026954.1-201ENST00000429771 1293 ntBASIC18.58■□□□□ 0.56
PTPN18Q99952 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PTPN18Q99952 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC18.58■□□□□ 0.56
PTPN18Q99952 FTH1P14-201ENST00000482930 551 ntBASIC18.58■□□□□ 0.56
PTPN18Q99952 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.58■□□□□ 0.56
PTPN18Q99952 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC18.58■□□□□ 0.56
PTPN18Q99952 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.58■□□□□ 0.56
PTPN18Q99952 ENPP7P5-201ENST00000541031 1031 ntBASIC18.58■□□□□ 0.56
PTPN18Q99952 PTP4A1P2-201ENST00000546033 454 ntBASIC18.58■□□□□ 0.56
PTPN18Q99952 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.58■□□□□ 0.56
PTPN18Q99952 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.58■□□□□ 0.56
PTPN18Q99952 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.58■□□□□ 0.56
PTPN18Q99952 AC124283.3-201ENST00000570869 594 ntBASIC18.58■□□□□ 0.56
PTPN18Q99952 MIR4321-201ENST00000592276 80 ntBASIC18.58■□□□□ 0.56
PTPN18Q99952 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.58■□□□□ 0.56
PTPN18Q99952 AC009542.2-202ENST00000619004 1067 ntBASIC18.58■□□□□ 0.56
PTPN18Q99952 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN18Q99952 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN18Q99952 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.58■□□□□ 0.56
PTPN18Q99952 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN18Q99952 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.58■□□□□ 0.56
PTPN18Q99952 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.58■□□□□ 0.56
PTPN18Q99952 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
PTPN18Q99952 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN18Q99952 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.58■□□□□ 0.56
PTPN18Q99952 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PTPN18Q99952 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PTPN18Q99952 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.58■□□□□ 0.56
PTPN18Q99952 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PTPN18Q99952 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PTPN18Q99952 MSTO2P-201ENST00000314835 1709 ntBASIC18.57■□□□□ 0.56
PTPN18Q99952 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PTPN18Q99952 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.57■□□□□ 0.56
PTPN18Q99952 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN18Q99952 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PTPN18Q99952 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN18Q99952 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN18Q99952 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN18Q99952 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.57■□□□□ 0.56
PTPN18Q99952 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN18Q99952 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN18Q99952 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN18Q99952 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN18Q99952 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PTPN18Q99952 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN18Q99952 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN18Q99952 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.57■□□□□ 0.56
PTPN18Q99952 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN18Q99952 AC092506.1-202ENST00000401022 528 ntBASIC18.57■□□□□ 0.56
PTPN18Q99952 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms