Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ABCA3Q99758 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC21.42■■□□□ 1.02
ABCA3Q99758 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ABCA3Q99758 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
ABCA3Q99758 AGER-206ENST00000375070 1463 ntTSL 5 BASIC21.42■■□□□ 1.02
ABCA3Q99758 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ABCA3Q99758 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC21.42■■□□□ 1.02
ABCA3Q99758 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC21.42■■□□□ 1.02
ABCA3Q99758 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.42■■□□□ 1.02
ABCA3Q99758 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
ABCA3Q99758 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC21.42■■□□□ 1.02
ABCA3Q99758 USP40-206ENST00000443711 628 ntTSL 2 BASIC21.42■■□□□ 1.02
ABCA3Q99758 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC21.42■■□□□ 1.02
ABCA3Q99758 Z93015.1-201ENST00000451718 390 ntBASIC21.42■■□□□ 1.02
ABCA3Q99758 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC21.42■■□□□ 1.02
ABCA3Q99758 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC21.42■■□□□ 1.02
ABCA3Q99758 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC21.42■■□□□ 1.02
ABCA3Q99758 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC21.42■■□□□ 1.02
ABCA3Q99758 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
ABCA3Q99758 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC21.42■■□□□ 1.02
ABCA3Q99758 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
ABCA3Q99758 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC21.42■■□□□ 1.02
ABCA3Q99758 AC060834.1-201ENST00000443027 2032 ntBASIC21.42■■□□□ 1.02
ABCA3Q99758 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
ABCA3Q99758 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ABCA3Q99758 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
ABCA3Q99758 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.41■■□□□ 1.02
ABCA3Q99758 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ABCA3Q99758 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
ABCA3Q99758 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC21.41■■□□□ 1.02
ABCA3Q99758 KRT18P43-201ENST00000469825 1281 ntBASIC21.41■■□□□ 1.02
ABCA3Q99758 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC21.41■■□□□ 1.02
ABCA3Q99758 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC21.41■■□□□ 1.02
ABCA3Q99758 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC21.41■■□□□ 1.02
ABCA3Q99758 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC21.41■■□□□ 1.02
ABCA3Q99758 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ABCA3Q99758 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
ABCA3Q99758 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
ABCA3Q99758 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ABCA3Q99758 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.41■■□□□ 1.02
ABCA3Q99758 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
ABCA3Q99758 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ABCA3Q99758 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC21.41■■□□□ 1.02
ABCA3Q99758 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.41■■□□□ 1.02
ABCA3Q99758 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
ABCA3Q99758 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
ABCA3Q99758 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ABCA3Q99758 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
ABCA3Q99758 BRF1-202ENST00000379932 884 ntTSL 5 BASIC21.41■■□□□ 1.02
ABCA3Q99758 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ABCA3Q99758 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ABCA3Q99758 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC21.41■■□□□ 1.02
ABCA3Q99758 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC21.41■■□□□ 1.02
ABCA3Q99758 HIST2H2BC-201ENST00000498492 580 ntBASIC21.41■■□□□ 1.02
ABCA3Q99758 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
ABCA3Q99758 AP001063.1-201ENST00000568332 529 ntBASIC21.41■■□□□ 1.02
ABCA3Q99758 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC21.41■■□□□ 1.02
ABCA3Q99758 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC21.41■■□□□ 1.02
ABCA3Q99758 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC21.41■■□□□ 1.02
ABCA3Q99758 AC091271.1-201ENST00000611877 1162 ntBASIC21.41■■□□□ 1.02
ABCA3Q99758 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
ABCA3Q99758 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ABCA3Q99758 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
ABCA3Q99758 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.4■■□□□ 1.02
ABCA3Q99758 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ABCA3Q99758 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
ABCA3Q99758 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ABCA3Q99758 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ABCA3Q99758 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.4■■□□□ 1.02
ABCA3Q99758 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC21.4■■□□□ 1.02
ABCA3Q99758 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC21.4■■□□□ 1.02
ABCA3Q99758 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.4■■□□□ 1.02
ABCA3Q99758 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ABCA3Q99758 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ABCA3Q99758 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ABCA3Q99758 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ABCA3Q99758 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ABCA3Q99758 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ABCA3Q99758 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ABCA3Q99758 REEP1-202ENST00000453231 940 ntTSL 2 BASIC21.4■■□□□ 1.02
ABCA3Q99758 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
ABCA3Q99758 PFN2-215ENST00000497148 743 ntTSL 4 BASIC21.4■■□□□ 1.02
ABCA3Q99758 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC21.4■■□□□ 1.02
ABCA3Q99758 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
ABCA3Q99758 AC138951.2-201ENST00000623455 1161 ntBASIC21.4■■□□□ 1.02
ABCA3Q99758 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
ABCA3Q99758 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ABCA3Q99758 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
ABCA3Q99758 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC21.4■■□□□ 1.02
ABCA3Q99758 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ABCA3Q99758 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ABCA3Q99758 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ABCA3Q99758 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC21.39■■□□□ 1.02
ABCA3Q99758 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC21.39■■□□□ 1.02
ABCA3Q99758 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ABCA3Q99758 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
ABCA3Q99758 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
ABCA3Q99758 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ABCA3Q99758 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
ABCA3Q99758 AC004987.2-201ENST00000395959 1148 ntBASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms