Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH3Q96II8 AC091046.1-201ENST00000331871 207 ntBASIC17.71■□□□□ 0.43
LRCH3Q96II8 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH3Q96II8 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.71■□□□□ 0.43
LRCH3Q96II8 IGF1-203ENST00000392904 761 ntTSL 5 BASIC17.71■□□□□ 0.43
LRCH3Q96II8 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH3Q96II8 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.71■□□□□ 0.43
LRCH3Q96II8 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH3Q96II8 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.71■□□□□ 0.43
LRCH3Q96II8 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.71■□□□□ 0.43
LRCH3Q96II8 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.71■□□□□ 0.43
LRCH3Q96II8 MIR5189-201ENST00000577370 114 ntBASIC17.71■□□□□ 0.43
LRCH3Q96II8 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.71■□□□□ 0.43
LRCH3Q96II8 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH3Q96II8 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.71■□□□□ 0.43
LRCH3Q96II8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.71■□□□□ 0.43
LRCH3Q96II8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH3Q96II8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH3Q96II8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRCH3Q96II8 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.71■□□□□ 0.43
LRCH3Q96II8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LRCH3Q96II8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
LRCH3Q96II8 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRCH3Q96II8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRCH3Q96II8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
LRCH3Q96II8 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.71■□□□□ 0.42
LRCH3Q96II8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRCH3Q96II8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.7■□□□□ 0.42
LRCH3Q96II8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.7■□□□□ 0.42
LRCH3Q96II8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.7■□□□□ 0.42
LRCH3Q96II8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH3Q96II8 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.7■□□□□ 0.42
LRCH3Q96II8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH3Q96II8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
LRCH3Q96II8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.7■□□□□ 0.42
LRCH3Q96II8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LRCH3Q96II8 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
LRCH3Q96II8 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
LRCH3Q96II8 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH3Q96II8 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH3Q96II8 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH3Q96II8 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.7■□□□□ 0.42
LRCH3Q96II8 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH3Q96II8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.7■□□□□ 0.42
LRCH3Q96II8 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.7■□□□□ 0.42
LRCH3Q96II8 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.7■□□□□ 0.42
LRCH3Q96II8 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC17.7■□□□□ 0.42
LRCH3Q96II8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.7■□□□□ 0.42
LRCH3Q96II8 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.7■□□□□ 0.42
LRCH3Q96II8 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH3Q96II8 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
LRCH3Q96II8 TDH-203ENST00000531764 1110 ntBASIC17.7■□□□□ 0.42
LRCH3Q96II8 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.7■□□□□ 0.42
LRCH3Q96II8 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC17.7■□□□□ 0.42
LRCH3Q96II8 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC17.7■□□□□ 0.42
LRCH3Q96II8 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.7■□□□□ 0.42
LRCH3Q96II8 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.7■□□□□ 0.42
LRCH3Q96II8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH3Q96II8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH3Q96II8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH3Q96II8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH3Q96II8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH3Q96II8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.7■□□□□ 0.42
LRCH3Q96II8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.7■□□□□ 0.42
LRCH3Q96II8 AC090340.1-201ENST00000620778 4980 ntBASIC17.7■□□□□ 0.42
LRCH3Q96II8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH3Q96II8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH3Q96II8 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
LRCH3Q96II8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.69■□□□□ 0.42
LRCH3Q96II8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.69■□□□□ 0.42
LRCH3Q96II8 KRT8P19-201ENST00000551916 1455 ntBASIC17.69■□□□□ 0.42
LRCH3Q96II8 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH3Q96II8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH3Q96II8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH3Q96II8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH3Q96II8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH3Q96II8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LRCH3Q96II8 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.69■□□□□ 0.42
LRCH3Q96II8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH3Q96II8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.69■□□□□ 0.42
LRCH3Q96II8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH3Q96II8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH3Q96II8 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LRCH3Q96II8 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH3Q96II8 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH3Q96II8 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.69■□□□□ 0.42
LRCH3Q96II8 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.69■□□□□ 0.42
LRCH3Q96II8 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.69■□□□□ 0.42
LRCH3Q96II8 AC104596.2-201ENST00000512793 793 ntBASIC17.69■□□□□ 0.42
LRCH3Q96II8 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.69■□□□□ 0.42
LRCH3Q96II8 AKR1B10P2-201ENST00000577332 927 ntBASIC17.69■□□□□ 0.42
LRCH3Q96II8 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.69■□□□□ 0.42
LRCH3Q96II8 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.69■□□□□ 0.42
LRCH3Q96II8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH3Q96II8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.69■□□□□ 0.42
LRCH3Q96II8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
LRCH3Q96II8 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LRCH3Q96II8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH3Q96II8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH3Q96II8 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms